Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1601 ATGGAGCGGTACGGCCGGACCAGTGAAGGGTCGCAGTCTGATCCGTCACCGGAATGGACCGGAACGGGAGGGGAAACAGGGCTCGAAGAGGCTGTGTGGCAATTCGAATTGGGTGGCGGTGAATCGTACCCGCAACGGCCCGATGAGGCCGATTGTATCTACTATTTGAGGACTGGTTTTTGTGGGTACGGCTCGCGATGTCGGTTCAATCATCCTCGAGACCGTGGCGCGGTTATTGGAGCTGCAAGGACAGGAGGGGAGTTCCCAGAACGAGTAGGCCAGCCTGTATGCCAGTATTATATGAGGACAGGATCATGCAAATTTGGCTCATCCTGCAAGTATCACCATCCAAGGCAGGGAGGGGGCACTTTTAGTCCTGTGTCACTAAATTATTATGGATATCCATTGCGACCGGGTGAGAAAGAGTGTTCATATTATGTGAAAACGGGACAATGCAAGTTTGGCAGAACTTGTAAATTCCACCATCCGCAGCCTGCTGGCATGCAAATTCCAGCACAAACACCAGTTCCCCCGGTTTCACCTCTACCTGTACCGGTACCTTCTCCATTATATCCAACTGTACAGCCATCATCTGGCCCTTCATCATCACAATATGGTGTAATGGTTGCAACCCCAAGGCCACCTCTGTTACCTGGCTCTTTAGTCCATAGTCCCTATGGGCAGCTGGTTTTGTCCCCGGCTGTAGTCCCTTTTCCAGGTTGGAGTCCTTATCAGCCTCCTGCAAGCCCCTTATTTCCTTCAAGTAATCCATCTAACATTGGTTCAGCGCAGCTTTATGGGATGGGTCAGCTACCTCCATCAGCATCATCTTATAGTGGACAGTATCAACCTCCAGGCTCCTCAGTCGGTCCTTCAGGCAGTAGTCAGAAGGAGCAATCATTTCCAGAAAGACCTGGTCAGCCGGAATGTCAGTATTATATGAAAACGGGGGAGTGTAAATTTGGTCCATCCTGTAGATATCATCATCCACCTGAATTAGTTGCTCCAAAAACAAATGTGGTCCTTAGTCCTGTGGGCCTTCCTTTGCGCCCGGGAATTTACAAGAAAAATAGAGGATCCAATGGAGATAGGGGGGCACCTCCTTGCACTCATTATGCACAGCGTGGGGTGTGTAAGTTTGGGTCAGCCTGCAAATTTGATCATCCTATTGGAGCATTGAGTTATAGTCCATCTGCTTCCTCCCTTGCTGATATGCCGGTTGCACCCTATCCTGTGGGTTCATCAATTGGCACTCTTGCCCCATCATCTTCATCAGAATTGCGGCCTGAACTCATCTCAGGATCCGGCAATGAGTCTGCATCATCCAGAATATCTTCATCAATGAGCACATCAACGGCATCAGTTGGCTTGACCTTGTCATCTGGTGGATCCATTTCTCAATCAACTGTTCAACAATCTGCTCAGAGTTCCAGCCCTTCAGCAATTACCAATAGCATTGCAAGCAGCTCGATCTCTCACACCTCTAGTTAA 1491 0.4943 MERYGRTSEGSQSDPSPEWTGTGGETGLEEAVWQFELGGGESYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARTGGEFPERVGQPVCQYYMRTGSCKFGSSCKYHHPRQGGGTFSPVSLNYYGYPLRPGEKECSYYVKTGQCKFGRTCKFHHPQPAGMQIPAQTPVPPVSPLPVPVPSPLYPTVQPSSGPSSSQYGVMVATPRPPLLPGSLVHSPYGQLVLSPAVVPFPGWSPYQPPASPLFPSSNPSNIGSAQLYGMGQLPPSASSYSGQYQPPGSSVGPSGSSQKEQSFPERPGQPECQYYMKTGECKFGPSCRYHHPPELVAPKTNVVLSPVGLPLRPGIYKKNRGSNGDRGAPPCTHYAQRGVCKFGSACKFDHPIGALSYSPSASSLADMPVAPYPVGSSIGTLAPSSSSELRPELISGSGNESASSRISSSMSTSTASVGLTLSSGGSISQSTVQQSAQSSSPSAITNSIASSSISHTSS 496
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1601 496 ProSiteProfiles Zinc finger C3H1-type profile. 363 391 IPR000571 GO:0046872
Prci14g1601 496 ProSiteProfiles Zinc finger C3H1-type profile. 137 165 IPR000571 GO:0046872
Prci14g1601 496 MobiDBLite consensus disorder prediction 263 302 - -
Prci14g1601 496 SUPERFAMILY CCCH zinc finger 368 393 IPR036855 GO:0046872
Prci14g1601 496 PANTHER PROTEIN PHOSPHATASE RELATED 35 425 - -
Prci14g1601 496 MobiDBLite consensus disorder prediction 263 307 - -
Prci14g1601 496 MobiDBLite consensus disorder prediction 420 447 - -
Prci14g1601 496 MobiDBLite consensus disorder prediction 461 496 - -
Prci14g1601 496 SUPERFAMILY CCCH zinc finger 308 332 IPR036855 GO:0046872
Prci14g1601 496 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 367 389 IPR000571 GO:0046872
Prci14g1601 496 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 139 164 IPR000571 GO:0046872
Prci14g1601 496 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 306 331 IPR000571 GO:0046872
Prci14g1601 496 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 48 73 IPR000571 GO:0046872
Prci14g1601 496 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 94 118 IPR000571 GO:0046872
Prci14g1601 496 SUPERFAMILY CCCH zinc finger 94 119 IPR036855 GO:0046872
Prci14g1601 496 SUPERFAMILY CCCH zinc finger 48 74 IPR036855 GO:0046872
Prci14g1601 496 ProSiteProfiles Zinc finger C3H1-type profile. 304 332 IPR000571 GO:0046872
Prci14g1601 496 Gene3D - 124 170 - -
Prci14g1601 496 SMART c3hfinal6 46 73 IPR000571 GO:0046872
Prci14g1601 496 SMART c3hfinal6 137 164 IPR000571 GO:0046872
Prci14g1601 496 SMART c3hfinal6 91 118 IPR000571 GO:0046872
Prci14g1601 496 SMART c3hfinal6 363 390 IPR000571 GO:0046872
Prci14g1601 496 SMART c3hfinal6 304 331 IPR000571 GO:0046872
Prci14g1601 496 Gene3D - 294 343 - -
Prci14g1601 496 Gene3D - 44 121 - -
Prci14g1601 496 Gene3D - 352 411 - -
Prci14g1601 496 SUPERFAMILY CCCH zinc finger 139 165 IPR036855 GO:0046872
Prci14g1601 496 FunFam Zinc finger nuclease 2 45 122 - -
Prci14g1601 496 ProSiteProfiles Zinc finger C3H1-type profile. 46 74 IPR000571 GO:0046872
Prci14g1601 496 MobiDBLite consensus disorder prediction 1 25 - -
Prci14g1601 496 ProSiteProfiles Zinc finger C3H1-type profile. 91 119 IPR000571 GO:0046872
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci14g1601 Prci-Chr14 23391874 23398627 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1601 1 458 C2H2 Transcription Factor Family AT5G18550 56.237 1.51e-157 454
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci14g1601 zf-CCCH 8.8e-10 CL0537
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1601 - - gmx:100789405 649.432