Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci14g1601 | ATGGAGCGGTACGGCCGGACCAGTGAAGGGTCGCAGTCTGATCCGTCACCGGAATGGACCGGAACGGGAGGGGAAACAGGGCTCGAAGAGGCTGTGTGGCAATTCGAATTGGGTGGCGGTGAATCGTACCCGCAACGGCCCGATGAGGCCGATTGTATCTACTATTTGAGGACTGGTTTTTGTGGGTACGGCTCGCGATGTCGGTTCAATCATCCTCGAGACCGTGGCGCGGTTATTGGAGCTGCAAGGACAGGAGGGGAGTTCCCAGAACGAGTAGGCCAGCCTGTATGCCAGTATTATATGAGGACAGGATCATGCAAATTTGGCTCATCCTGCAAGTATCACCATCCAAGGCAGGGAGGGGGCACTTTTAGTCCTGTGTCACTAAATTATTATGGATATCCATTGCGACCGGGTGAGAAAGAGTGTTCATATTATGTGAAAACGGGACAATGCAAGTTTGGCAGAACTTGTAAATTCCACCATCCGCAGCCTGCTGGCATGCAAATTCCAGCACAAACACCAGTTCCCCCGGTTTCACCTCTACCTGTACCGGTACCTTCTCCATTATATCCAACTGTACAGCCATCATCTGGCCCTTCATCATCACAATATGGTGTAATGGTTGCAACCCCAAGGCCACCTCTGTTACCTGGCTCTTTAGTCCATAGTCCCTATGGGCAGCTGGTTTTGTCCCCGGCTGTAGTCCCTTTTCCAGGTTGGAGTCCTTATCAGCCTCCTGCAAGCCCCTTATTTCCTTCAAGTAATCCATCTAACATTGGTTCAGCGCAGCTTTATGGGATGGGTCAGCTACCTCCATCAGCATCATCTTATAGTGGACAGTATCAACCTCCAGGCTCCTCAGTCGGTCCTTCAGGCAGTAGTCAGAAGGAGCAATCATTTCCAGAAAGACCTGGTCAGCCGGAATGTCAGTATTATATGAAAACGGGGGAGTGTAAATTTGGTCCATCCTGTAGATATCATCATCCACCTGAATTAGTTGCTCCAAAAACAAATGTGGTCCTTAGTCCTGTGGGCCTTCCTTTGCGCCCGGGAATTTACAAGAAAAATAGAGGATCCAATGGAGATAGGGGGGCACCTCCTTGCACTCATTATGCACAGCGTGGGGTGTGTAAGTTTGGGTCAGCCTGCAAATTTGATCATCCTATTGGAGCATTGAGTTATAGTCCATCTGCTTCCTCCCTTGCTGATATGCCGGTTGCACCCTATCCTGTGGGTTCATCAATTGGCACTCTTGCCCCATCATCTTCATCAGAATTGCGGCCTGAACTCATCTCAGGATCCGGCAATGAGTCTGCATCATCCAGAATATCTTCATCAATGAGCACATCAACGGCATCAGTTGGCTTGACCTTGTCATCTGGTGGATCCATTTCTCAATCAACTGTTCAACAATCTGCTCAGAGTTCCAGCCCTTCAGCAATTACCAATAGCATTGCAAGCAGCTCGATCTCTCACACCTCTAGTTAA | 1491 | 0.4943 | MERYGRTSEGSQSDPSPEWTGTGGETGLEEAVWQFELGGGESYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARTGGEFPERVGQPVCQYYMRTGSCKFGSSCKYHHPRQGGGTFSPVSLNYYGYPLRPGEKECSYYVKTGQCKFGRTCKFHHPQPAGMQIPAQTPVPPVSPLPVPVPSPLYPTVQPSSGPSSSQYGVMVATPRPPLLPGSLVHSPYGQLVLSPAVVPFPGWSPYQPPASPLFPSSNPSNIGSAQLYGMGQLPPSASSYSGQYQPPGSSVGPSGSSQKEQSFPERPGQPECQYYMKTGECKFGPSCRYHHPPELVAPKTNVVLSPVGLPLRPGIYKKNRGSNGDRGAPPCTHYAQRGVCKFGSACKFDHPIGALSYSPSASSLADMPVAPYPVGSSIGTLAPSSSSELRPELISGSGNESASSRISSSMSTSTASVGLTLSSGGSISQSTVQQSAQSSSPSAITNSIASSSISHTSS | 496 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci14g1601 | 496 | ProSiteProfiles | Zinc finger C3H1-type profile. | 363 | 391 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | ProSiteProfiles | Zinc finger C3H1-type profile. | 137 | 165 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | MobiDBLite | consensus disorder prediction | 263 | 302 | - | - | |
Prci14g1601 | 496 | SUPERFAMILY | CCCH zinc finger | 368 | 393 | IPR036855 | GO:0046872 | |
Prci14g1601 | 496 | PANTHER | PROTEIN PHOSPHATASE RELATED | 35 | 425 | - | - | |
Prci14g1601 | 496 | MobiDBLite | consensus disorder prediction | 263 | 307 | - | - | |
Prci14g1601 | 496 | MobiDBLite | consensus disorder prediction | 420 | 447 | - | - | |
Prci14g1601 | 496 | MobiDBLite | consensus disorder prediction | 461 | 496 | - | - | |
Prci14g1601 | 496 | SUPERFAMILY | CCCH zinc finger | 308 | 332 | IPR036855 | GO:0046872 | |
Prci14g1601 | 496 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 367 | 389 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 139 | 164 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 306 | 331 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 48 | 73 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 94 | 118 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | SUPERFAMILY | CCCH zinc finger | 94 | 119 | IPR036855 | GO:0046872 | |
Prci14g1601 | 496 | SUPERFAMILY | CCCH zinc finger | 48 | 74 | IPR036855 | GO:0046872 | |
Prci14g1601 | 496 | ProSiteProfiles | Zinc finger C3H1-type profile. | 304 | 332 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | Gene3D | - | 124 | 170 | - | - | |
Prci14g1601 | 496 | SMART | c3hfinal6 | 46 | 73 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | SMART | c3hfinal6 | 137 | 164 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | SMART | c3hfinal6 | 91 | 118 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | SMART | c3hfinal6 | 363 | 390 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | SMART | c3hfinal6 | 304 | 331 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | Gene3D | - | 294 | 343 | - | - | |
Prci14g1601 | 496 | Gene3D | - | 44 | 121 | - | - | |
Prci14g1601 | 496 | Gene3D | - | 352 | 411 | - | - | |
Prci14g1601 | 496 | SUPERFAMILY | CCCH zinc finger | 139 | 165 | IPR036855 | GO:0046872 | |
Prci14g1601 | 496 | FunFam | Zinc finger nuclease 2 | 45 | 122 | - | - | |
Prci14g1601 | 496 | ProSiteProfiles | Zinc finger C3H1-type profile. | 46 | 74 | IPR000571 | GO:0046872 | |
Prci14g1601 | 496 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Prci14g1601 | 496 | ProSiteProfiles | Zinc finger C3H1-type profile. | 91 | 119 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci14g1601 | Prci-Chr14 | 23391874 | 23398627 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci14g1601 | 1 | 458 | C2H2 Transcription Factor Family | AT5G18550 | 56.237 | 1.51e-157 | 454 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Prci14g1601 | zf-CCCH | 8.8e-10 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci14g1601 | - | - | gmx:100789405 | 649.432 |