Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1600 ATGTCCACCTCTAGAACCCTAGATTCTTCTTCTTCATCATCGTCATCATCACCGTCCTTCAAAGGCTATGAAGCAAACCAGACCCAGATGGTTCTGTCTCTTCTTCAGAGAAACACATCTCCTTGTGGTGGTGAGAAAAGAGGAAGAAGGAAACAATCAGAACCAGGAAGGTTTCTTGGAGTCAGAAGAAGACCTTGGGGAAGATATGCTGCAGAAATTAGGGACCCCACAACAAAAGAAAGACATTGGCTTGGAACTTTTGACACTGCTCAAGAAGCTGCTCTGGCTTATGACAGAGCTGCTCTGTCCATGAAAGGAAGCCAAGCTAGAACAAATTTTATATACTCTGACACTACCACCTCTTTTCACACACTTCTTTCTCCTTTGCATGTTCAATCCCTTTCACCAACCTATCAGACCAGTGCTAGTTCAGTATCTGATCTGTCTCATCAGAATACTTCTAATAATTCCACTCAACTTCATCAGATTCAGCCTAATTTTCCCACTGCCCAGATGAACAATGATATGCCTGTTTCTTCAGCTGAAACTGAGAACTTGTTCTCGTTTTCTGGTGATTCCAACTCTGGATATTTGGAATGTGTGGTTCCTGATAACTGTCTCAGAAGGAACAATGATGAGAGTTTTGCTTCAAGTGACCACCCGAAGTTCCAATCTCAATCTCATCAACAACAAGGCCTCAAGATTCCAACAGCGGCATGCGAAAGTTCAGATTTTTATTCATACCCAGATGAAATCTCTCAGGGACTGTCGTGGGATTCTGATTGCAGTGAGCTTTCTGCTATATTCAAGAACAACCCAACGAGGGTTGAAGAAGATGAGCGCTTCATTGTGAATCCTCGGATCAGTTCAAGCTATGATCTAATGACTGAGGAATTTGCTTCAGCTTCAGCTTCTTCATATAACTTTGGAGATGTTGATATGGGATACTCAATGTCCTAA 960 0.424 MSTSRTLDSSSSSSSSSPSFKGYEANQTQMVLSLLQRNTSPCGGEKRGRRKQSEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYSDTTTSFHTLLSPLHVQSLSPTYQTSASSVSDLSHQNTSNNSTQLHQIQPNFPTAQMNNDMPVSSAETENLFSFSGDSNSGYLECVVPDNCLRRNNDESFASSDHPKFQSQSHQQQGLKIPTAACESSDFYSYPDEISQGLSWDSDCSELSAIFKNNPTRVEEDERFIVNPRISSSYDLMTEEFASASASSYNFGDVDMGYSMS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1600 319 FunFam Ethylene-responsive transcription factor 2 57 115 - -
Prci14g1600 319 MobiDBLite consensus disorder prediction 217 233 - -
Prci14g1600 319 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Prci14g1600 319 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Prci14g1600 319 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Prci14g1600 319 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 31 212 - -
Prci14g1600 319 MobiDBLite consensus disorder prediction 212 233 - -
Prci14g1600 319 SUPERFAMILY DNA-binding domain 58 115 IPR016177 GO:0003677
Prci14g1600 319 MobiDBLite consensus disorder prediction 43 57 - -
Prci14g1600 319 Pfam AP2 domain 60 106 IPR001471 GO:0003700|GO:0006355
Prci14g1600 319 CDD AP2 57 113 IPR001471 GO:0003700|GO:0006355
Prci14g1600 319 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Prci14g1600 319 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Prci14g1600 319 MobiDBLite consensus disorder prediction 1 57 - -
Prci14g1600 319 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1600 Prci-Chr14 23387877 23388836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1600 1 208 AP2-EREBP Transcription Factor Family AT5G18560 44.444 2.20e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci14g1600 AP2 1.3e-12 CL0081