Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1599 ATGAAGTCATCGGAAAAGCCAGACTTCGTTCTCTCCCTTTTCAGAAAATGTGGTTTTTCAAATTCGCAGATTCGCAATATCATCAAGAAGGCACCGAGATTGCTTCTGAGTGATCCTGGGATGACTATTTGGCCTAAGCTTGATTTTTTACTATCTAAAGGTGCGTCTAGCTCTCAACTTGTTGACATCGTGACCAGAAGCCCTCGAATCTTATTCAGAAGCTTAGAAAATCGTTTAATACCTAGTTATAATTTTGTTAAAGGTTTTGTTGGATCTGATCAAAGGACTATCACCTCAATCCGGCGTAGTCATAGAATAATGTATTGTAATTTCCTGGAAACTAACATTCAACTCTTGCTTGACGTCGGAGTGCCTAAATCTGGCATTGCTGGATTGCTTCATGCGTGGCCTAGCTTGTGTACTATGAATTTAGATAAATTTAGAGTGGCAGTTGAGGGAGTAAAGGAGAGAGGTTTTGACCCTTCAAAATCAAAATTCATTCCTGCATTATATGCCACAAATAAGTTGAGCAAATCCATTTGGATTAGGAAGGTTGAATTCTATAAGAAGTGGGGCTGGTCTGAAGAAGAGATTGATAAAGCATTTGCACTGCATCCTCATTGTATGCTAAAATCTGAATCTAAGATTAAGGCAGTGATGGAGTTCTTTGTGCATGACATGGGTTGGGACTCCTGTGTGCTTGCCAATAATCCCATATTTTTTTCAATGAGTTTGGAGAAAAGAATCATCCCAAGGGCTCATGTCTTGCGATATATTCATTCAAGAGGTTTAATTAAGAATGCTTGTATCGTATACCCTTATTATATTACTGAAAACATATTCCTTGAGAGATATGTCAATCGTTTTGACGATGAATCTCCTCAATTATTGAAATTGTATCAAGAGACAATGAATCGTTCAAAAAAAACTTGA 933 0.3762 MKSSEKPDFVLSLFRKCGFSNSQIRNIIKKAPRLLLSDPGMTIWPKLDFLLSKGASSSQLVDIVTRSPRILFRSLENRLIPSYNFVKGFVGSDQRTITSIRRSHRIMYCNFLETNIQLLLDVGVPKSGIAGLLHAWPSLCTMNLDKFRVAVEGVKERGFDPSKSKFIPALYATNKLSKSIWIRKVEFYKKWGWSEEEIDKAFALHPHCMLKSESKIKAVMEFFVHDMGWDSCVLANNPIFFSMSLEKRIIPRAHVLRYIHSRGLIKNACIVYPYYITENIFLERYVNRFDDESPQLLKLYQETMNRSKKT 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1599 310 Gene3D Transcription termination factor 3, mitochondrial 91 298 IPR038538 -
Prci14g1599 310 PANTHER CGI-12 PROTEIN-RELATED 4 288 IPR003690 GO:0003690|GO:0006355
Prci14g1599 310 Pfam mTERF 177 267 IPR003690 GO:0003690|GO:0006355
Prci14g1599 310 Pfam mTERF 11 160 IPR003690 GO:0003690|GO:0006355
Prci14g1599 310 FunFam Mitochondrial transcription termination factor-like 75 293 - -
Prci14g1599 310 SMART mt_12 231 265 IPR003690 GO:0003690|GO:0006355
Prci14g1599 310 SMART mt_12 199 230 IPR003690 GO:0003690|GO:0006355
Prci14g1599 310 SMART mt_12 25 56 IPR003690 GO:0003690|GO:0006355
Prci14g1599 310 SMART mt_12 130 160 IPR003690 GO:0003690|GO:0006355
Prci14g1599 310 SMART mt_12 97 125 IPR003690 GO:0003690|GO:0006355
Prci14g1599 310 SMART mt_12 61 92 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1599 Prci-Chr14 23361833 23363484 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci14g1599 mTERF 1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1599 K15031 - vvi:100252802 288.115