LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g1592	ATGGGTGGGTGTTTTCCTTGCTTTGGATCATCCAACAAGGAGGACAAAGGGTTGAAGGAAGTACCAGTCAAGAAGGATTCCTTTAAAGAAGGCTCAATTGTTGCCAAGTCTAACCACACAAATAGGGTTAGCTCAGATAAATCAAAATCAAAAAGTGGCTCTGATCCTAAGAAGGAACCACCTGTTCCCAAGGAACCAACAGCCCATATTGCTGCACAAACATTCACATTTCGAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCAGAATGCTTATTAGGTGAAGGAGGTTTTGGACGCGTCTACAAAGGTCGTCTGGAGAGCACAGGACAAGTAGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGAGAATTCTTGGTGGAGGTTCTTATGCTCAGCCTCTTGCATCATCCCAATCTTGTCAACTTAATCGGTTATTGTGCTGATGGTGATCAGAGGCTTCTTGTTTATGAATTTATGCCACTGGGCTCCTTAGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCTTTAGACTGGAACACAAGAATGAAAATTGCTGCTGGTGCTGCCAAGGGATTGGAATATTTGCATGACAAAGCAAACCCCCCTGTTATTTATAGAGACTTGAAGTCATCCAACATTCTCCTTGATGAGGGTTATCATCCCAAGCTATCTGATTTTGGGCTTGCAAAGCTTGGTCCTGTCGGTGATAAGACACATGTGTCTACACGAGTAATGGGAACATATGGCTACTGTGCTCCAGAGTATGCCATGACAGGCCAGCTAACTCTGAAATCTGATGTATATAGCTTTGGTGTTGTCTTTCTTGAACTTATTACTGGGCGCAAAGCTATCGACAATACCCGTGCACCCGGAGAGCATAATCTTGTTGCCTGGGCACGTCCTCTTTTTAAAGACCGTAGGAAGTTTCCAAAAATGGCTGATCCCTTGCTTCAAGGGCGCTACCCAATGCGAGGACTCTACCAAGCACTTGCAGTTGCAGCCATGTGTTTGCAGGAACAAGCAGCTACAAGGCCTCTTATTGGGGATGTTGTGACTGCTCTTACATACTTGGCGTCACAGACATATGACCCAAATGCAGCTACTCAGAATAATAGAGGTGGTTCATCAACCCCAAGGAGCAGGGATGACCGAAGGAGCATGGCCGATGGCGTTATGGATAGCCCTGATCGTGGGCGGAGTGGCTCCCCTTCCACTCACAAGAACTTGCCTGATGTTCGGAGGAGAGATGGTGGGGATCCAAGTGTTGGGAAAGAAGTTGGCAGAAGTGAAACTGGGTCAGGAAGAAGATGGGGATTGGATGATGTAGAAAGGCTGGAATCTCAGAGAGATAGCCCTGTAAATACTGGGAGAGCTAGGGAAACTCCGAGGAACCGTGACCTGGACAGAGAACGTGCAGTGGCAGAAGCGAAAGTATGGGGTGAGAATTGGAGAGAAAAGAAGAGGGCTAATGCAATGGGTAGCTTTGATGCCACAAATGAGTGA	1524	0.4665	MGGCFPCFGSSNKEDKGLKEVPVKKDSFKEGSIVAKSNHTNRVSSDKSKSKSGSDPKKEPPVPKEPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAATQNNRGGSSTPRSRDDRRSMADGVMDSPDRGRSGSPSTHKNLPDVRRRDGGDPSVGKEVGRSETGSGRRWGLDDVERLESQRDSPVNTGRARETPRNRDLDRERAVAEAKVWGENWREKKRANAMGSFDATNE	507

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g1592	507	SUPERFAMILY	Protein kinase-like (PK-like)	63	361	IPR011009	-
	Prci14g1592	507	MobiDBLite	consensus disorder prediction	42	64	-	-
	Prci14g1592	507	MobiDBLite	consensus disorder prediction	1	68	-	-
	Prci14g1592	507	MobiDBLite	consensus disorder prediction	384	399	-	-
	Prci14g1592	507	PANTHER	OS07G0668900 PROTEIN	4	373	-	-
	Prci14g1592	507	Pfam	Protein kinase domain	92	296	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g1592	507	Gene3D	Transferase(Phosphotransferase) domain 1	164	383	-	-
	Prci14g1592	507	FunFam	Serine/threonine-protein kinase PBS1	62	163	-	-
	Prci14g1592	507	Gene3D	Phosphorylase Kinase; domain 1	61	163	-	-
	Prci14g1592	507	MobiDBLite	consensus disorder prediction	371	478	-	-
	Prci14g1592	507	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	210	222	IPR008271	GO:0004672\|GO:0006468
	Prci14g1592	507	MobiDBLite	consensus disorder prediction	415	457	-	-
	Prci14g1592	507	ProSitePatterns	Protein kinases ATP-binding region signature.	93	116	IPR017441	GO:0005524
	Prci14g1592	507	FunFam	Serine/threonine-protein kinase PBS1	164	379	-	-
	Prci14g1592	507	CDD	STKc_IRAK	93	362	-	-
	Prci14g1592	507	MobiDBLite	consensus disorder prediction	13	32	-	-
	Prci14g1592	507	ProSiteProfiles	Protein kinase domain profile.	87	364	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g1592	507	SMART	serkin_6	87	364	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g1592	Prci-Chr14	23255120	23260983	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g1592	4	366	Glycoside Hydrolase	AT3G07070	66.027	1.32e-173	493

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Prci14g1592		Pkinase	1.1e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g1592	-		-	gmx:100814575	889.026