Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1588 ATGGAACGTTTCAGAACTGTCTCTGTTACACCATTGTTGCCATTAGTCTCTGATCAAGTTCCGCCTTCTTCTTCTTCTGATGAACCTGTTGTTGTTGTTGCAATGGCCGAGACGGGGAAAACCCCCGGCAAGCGTGCTAGTAGTACACAAATGGGTGGTCTAGAGAGGAGCGACCTTGTGTTGGAGCGTGATCGAAGGATGAAGATGAGTCACATGTTCAATGAGCTTCAATCCACCGTTCCTGGTCTCTTTCCCAAGGCTACGAGGGAAGTGATTGTGAACGAAACAATAAACTATATCAAAGACCTTGAGAAGAAGAAGAAAAGATTGGAAGAGCTTAAGGGGTTAATAATGGAACCAGAAGAAGCTGGAGGGAAGTTGATGCTTCCATGTTCAAGCAACAAGAATTCCTCCATCACAGTCTCTGTATCTGGAAACGTTGCCTTCTTTGGGGTTCAATCAAAAGCTCGATTTGGTTTGATCACAATGATCTTCAAGGTGTTCTATAAGCACAATGCTGAAATTTTGGCTGCGAATGTTTCTGTCAACAATGGAGAATTGACATTGGCAATCACGGCTTTGTTAGTTAATGATGATGGAAATGTAATTGCTGAGAAGATCAAGAGAGAGATTTTGGGTTTGTAG 645 0.4295 MERFRTVSVTPLLPLVSDQVPPSSSSDEPVVVVAMAETGKTPGKRASSTQMGGLERSDLVLERDRRMKMSHMFNELQSTVPGLFPKATREVIVNETINYIKDLEKKKKRLEELKGLIMEPEEAGGKLMLPCSSNKNSSITVSVSGNVAFFGVQSKARFGLITMIFKVFYKHNAEILAANVSVNNGELTLAITALLVNDDGNVIAEKIKREILGL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1588 214 Coils Coil 93 113 - -
Prci14g1588 214 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 54 193 IPR044278 GO:0003700|GO:0006355|GO:0009960
Prci14g1588 214 Pfam Helix-loop-helix DNA-binding domain 61 104 IPR011598 GO:0046983
Prci14g1588 214 Gene3D - 55 117 IPR036638 GO:0046983
Prci14g1588 214 CDD bHLH_SF 62 102 - -
Prci14g1588 214 SMART finulus 59 109 IPR011598 GO:0046983
Prci14g1588 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 53 103 IPR011598 GO:0046983
Prci14g1588 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 57 117 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1588 57 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 29.197 2.17e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci14g1588 HLH 6.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1588 - - gmx:102670256 172.94