Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1560 ATGGGTAATGTGAACGAGGAAGAAAATCAAAGGCAGGTTCCTCCAACAAGTGCTTGCAGACTGAGGACTGGGTCTTCTGATTCCATATCGAGTAATGGTAGGTTATCATTCTTCTTTGCTCTAATCATCGTGAATGATACTGAATTGAGATCGTTGTTCACTAACCCAATTCCCCCTCCTTCTAAGACCTTTGATTCAGAGAGTCAGTCAAACAATGCGCAGCGGCATGGTTTCTTTCGTTTGTTGAAGAAAGGACCCAAAATGCGTTTCCAACCCATTCTTTCAGTCAACAGTGTTCCAAAACTCACCAGAAGAAATAGTAAGAGATACAGGGAGAACCAGGTCCCACCTCTAAATTCACCACTAAATAATCCAGCTCTCAAGACAATTTTGGACACTGAATTGTTCTGCTTTAAAGCTTCATGGAAAAATTTCTCTTATGCAGAGATTGTGGCTGCGACAAACAACTTTAGCCATGAAAAAGTGATTGGTCAAGGAGGTTATGCTGTGGTTTACAAAGGCAAAATGGAAGATGGGCAGTTTGTTGCAATCAAGCAGCTCACAAGAGGAACTCTAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTGCACGTGAACCATCCCAATATTGCCAGATTGATTGGATACGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAGTTGTCTCCACATGGCAGCTTAGCATCCATACTTATGGTTTTGATTTCAGGACCTCGAGAGAAACTAGATTGGAGCTTTAGATGTAAGATTGCTTTTGGGACTGCTGATGGCCTTCGCTGTCTGCATGAGGAATGCCAAAGAAGGATAATTCACAGAGATATCAAGTCTTCTAATATTTTGCTCTCAGAGGACTTTGAAGCAATGATATCTGATTTTGGGCTATCGAAGTGGCTACCCGACCAATGGACTCACCACACAATCTCCAAAATTGAAGGCACGTTCGGCTACCTCCCTCCAGAATTCTTCATGTATGGTTTGGTAGACGAAAAGACTGATGTCTATGCTTATGGAGTGCTATTATTGGAGCTCATTACTGGACGACAAGCTTTGGATAGGTCACAGAAAAGTTTGGTGATGTGGGCAAAACCTTTGCTATCTACAAATAACATTAAAGAGCTCGTCGATCCATGTCTGAATGGTGCATACGATGAAGAACAAATGAAACTTGTAGTCTTAGTAGCTTCACTGTGTGTTGATCAATCTTCAGCTGAACGACCAAACATGAGCCAGGCAATAAAGATTCTAAAAGGAGAAGACGACAGCTTGGAGCTCATGAAAGCACGCCAGAAGTCCAAAATTCAAAGGACGTGCTCTGAAGAACTGTTAGACGCAGAGGAGTACGACTCAGCCAAGACTTTGAATGCTGAGGATCCACATATGGAGACTCTTCAAGGAAACTGTAACTCTAATGATGAGGAAAAGCAGCAACAACAACAACATTCACATCTATAG 1485 0.4202 MGNVNEEENQRQVPPTSACRLRTGSSDSISSNGRLSFFFALIIVNDTELRSLFTNPIPPPSKTFDSESQSNNAQRHGFFRLLKKGPKMRFQPILSVNSVPKLTRRNSKRYRENQVPPLNSPLNNPALKTILDTELFCFKASWKNFSYAEIVAATNNFSHEKVIGQGGYAVVYKGKMEDGQFVAIKQLTRGTLEEMTADFLSELGIIVHVNHPNIARLIGYGVEGGMFLVLQLSPHGSLASILMVLISGPREKLDWSFRCKIAFGTADGLRCLHEECQRRIIHRDIKSSNILLSEDFEAMISDFGLSKWLPDQWTHHTISKIEGTFGYLPPEFFMYGLVDEKTDVYAYGVLLLELITGRQALDRSQKSLVMWAKPLLSTNNIKELVDPCLNGAYDEEQMKLVVLVASLCVDQSSAERPNMSQAIKILKGEDDSLELMKARQKSKIQRTCSEELLDAEEYDSAKTLNAEDPHMETLQGNCNSNDEEKQQQQQHSHL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1560 494 MobiDBLite consensus disorder prediction 1 28 - -
Prci14g1560 494 MobiDBLite consensus disorder prediction 464 494 - -
Prci14g1560 494 PANTHER OS08G0249100 PROTEIN 66 460 IPR046958 -
Prci14g1560 494 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 234 440 - -
Prci14g1560 494 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Prci14g1560 494 SUPERFAMILY Protein kinase-like (PK-like) 138 426 IPR011009 -
Prci14g1560 494 Pfam Protein kinase domain 158 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g1560 494 SMART serkin_6 157 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g1560 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Prci14g1560 494 Gene3D Phosphorylase Kinase; domain 1 132 231 - -
Prci14g1560 494 MobiDBLite consensus disorder prediction 470 485 - -
Prci14g1560 494 Gene3D Transferase(Phosphotransferase) domain 1 234 453 - -
Prci14g1560 494 ProSiteProfiles Protein kinase domain profile. 157 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g1560 494 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 133 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1560 Prci-Chr14 22887784 22890498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1560 143 429 Receptor kinase-like Gene Family AT1G60800 43.003 4.82e-69 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci14g1560 Pkinase 6.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1560 - - lja:Lj6g3v1915960.1 613.224