Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1520 ATGGATGAGTACCAAGAGATGGAGAGATTTGGCATGGATAATGATTTTGAAGGTGGTGAATGGATTGGTGGTGAGTTCTACTATCGAAAGCGCAAAGAAAAACGCACTCAAACAAGAGAAGATGTTCTTTATGGGGTGTTTGCAGACTCTGATGATGATGAAGATGATTATAACAGAAAACGCAGGAAAGACCGTGACTTATCTAAGCAGCCTGACCTCAGCAAGCCTGTGAATTTTGTCTCTACTGGAACTTTTATGCCTAATCAAGATGATAACCGTTCTAAAGAACAGATGGAAGAAGAAAATTATGCGAGTGAGGATAGGCCAGCTTTAGGTCTTGGTATGGGAACTACTAGCACTTCTAGTTTTGGGTTAGGTTTTAATACAAATCATCGTGGAAATGCTTCTGATGATGATAATCACGACAACGATTTTCTGCCTACGGCATTTGGAAAGAGGATTAAGGAGGGAGCAATGAGAAGGGAGAGGGAAAAGGAAAGGGCAAAATTGGAAAAGAAGAGAGCGCAAGGAAAAACCCAAGCTGAAGATGGATTTCCAGATGTTGGGAAGTTTGAGAAGCATACAAAGGGGATTGGAATGAAGTTGTTGGAGAAAATGGGCTATAAAGGAGGTGGTCTTGGGAAGAATGAACAGGGTATTTTAGCTCCTGTTGAGGCTCATTTGAGGGCCAAGAATACAGGTATTGGATTTAATGACTCGAAGGCAACCACTCCTTTGCCTAGTGTGCAAGTTGAGAAGACAACATTGCCAGGGGTTGCTCAACCTACAGCTGTTAGAGCAAAGGAAAGGTTATGGTCAAAGCATTCAAGGTCAAAGAAGAAGAAAGATGAGGATGATTATATTACTGCTGAGGAATTGTTAGCAAGCAATCAAGAACAGGGTCTGGAGGTTGTGCAGAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAGTAATTACGAATTTGTCTGATTTGAATGCTGAGGAGAAGGCCAAGGAAAATGATGTTCCAATGCCAGAGCTTCAGCATAACGTGGGCTTAATTGTTAGGTTGGCTGAAGCAGACATCCAGGAGATTGATAGAAATTTGAGGAGAGAGAGGGAGACAGCACTTAGCTTGAAAAAAGAAAAAGAGAAGTTAGAAACTGAGGTAGCTCACCAAAAAAAGCAGTTGGAAGATCTAGAAGAAATAACAACTGTGCTAGACCGAGTTGGAGAAGAGAACTTAATGGGGACATTGACTTTGGATTTGCTTGCACAGTGCTTTGCTGACCTGCAGAAAAGATATGCTGATAGCTATAAGTTGTGTAACTTGTCATGTATTGCTTCTTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCGAAATCCATTACATGGGTTAGAGTTGGTATCACGGTGGAAAACATTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTAACATCACCTTATACTCAATTGATTTCTGAAGTTGTTTTACCAGCTGTCAGGATTTCTGGTATCAATACCTGGCAGGCACGGGATCCTGAGCCAATGTTACGGTTTTTGGAGTCCTGGGAAAAGTTGCTTCCTTCATCAGTTCTCACAGCCATGTTGGACAATATTGTCATGCCAAAATTGTCAAGTGCTGTAGATACATGGGAGCCACATCGTGAGACAATTCCTATCCATACTTGGGTGCACCCATGGTTACCATTGTTAGGACACAAGTTAGAGGGAATGTATCAGATGATACGCTTCAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGGATCTGCGTATGCTATATTGTCACCTTGGAAGACTGTATTTGATTCAGTGAGTTGGGAACAACTTATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTCTTGCAAGAGTTCCAAGTGAACCCAGCAGATCAGAAACTTGATCAGTTTTATTGGGTGATGAATTGGGCTTCTGCTGTTCCAATTCATCTGATGGTTGATATGATGGAGAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTACCATTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCAAATGAAAGTATTCGATATCAACTAAACCGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGCATGGAGGTGGTCCAACCTGGCTTGAAAGAAAACATCAGCTATCTTAGGGTACTTGAGCAAAGGCAATTTGAGGCTCAGCAGAAAGCAGCAGCTCATGCTCAAACTCAAGCTCCCTCAGGCTTGGGGGCTGCTGCCCATATGGATGGTGCAGCTGGTGTACATGAGATGAGCTTAAAAGAAGTCATTGAGGCCCATGCCCAACAACATGGCTTGCTATTCAAGCTTAAACCTGGTAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAGCATTATAATAGACTCTCTCAATCAAAAGGTATATGCCCAAACTGAGGATGCATGGTCTTTGGAATCTCTCCAAGGCTTACTGGAGCTGCATAGTAAGTCCCTTGGTCGGAGACGCTGA 2595 0.4235 MDEYQEMERFGMDNDFEGGEWIGGEFYYRKRKEKRTQTREDVLYGVFADSDDDEDDYNRKRRKDRDLSKQPDLSKPVNFVSTGTFMPNQDDNRSKEQMEEENYASEDRPALGLGMGTTSTSSFGLGFNTNHRGNASDDDNHDNDFLPTAFGKRIKEGAMRREREKERAKLEKKRAQGKTQAEDGFPDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGILAPVEAHLRAKNTGIGFNDSKATTPLPSVQVEKTTLPGVAQPTAVRAKERLWSKHSRSKKKKDEDDYITAEELLASNQEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDVPMPELQHNVGLIVRLAEADIQEIDRNLRRERETALSLKKEKEKLETEVAHQKKQLEDLEEITTVLDRVGEENLMGTLTLDLLAQCFADLQKRYADSYKLCNLSCIASSYALPLFIRVFQGWDPLRNPLHGLELVSRWKTLLQEEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTAMLDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWASAVPIHLMVDMMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHAQTQAPSGLGAAAHMDGAAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQTEDAWSLESLQGLLELHSKSLGRRR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1520 864 MobiDBLite consensus disorder prediction 114 133 - -
Prci14g1520 864 Pfam GC-rich sequence DNA-binding factor-like protein 416 682 IPR022783 -
Prci14g1520 864 MobiDBLite consensus disorder prediction 74 91 - -
Prci14g1520 864 Pfam G-patch domain 195 236 IPR000467 GO:0003676
Prci14g1520 864 PIRSF TFIP11 1 859 IPR024933 -
Prci14g1520 864 MobiDBLite consensus disorder prediction 32 188 - -
Prci14g1520 864 MobiDBLite consensus disorder prediction 53 71 - -
Prci14g1520 864 MobiDBLite consensus disorder prediction 134 188 - -
Prci14g1520 864 Coils Coil 158 180 - -
Prci14g1520 864 Pfam Tuftelin interacting protein N terminal 6 104 IPR022159 -
Prci14g1520 864 SMART G-patch_5 193 238 IPR000467 GO:0003676
Prci14g1520 864 ProSiteProfiles G-patch domain profile. 195 240 IPR000467 GO:0003676
Prci14g1520 864 Coils Coil 349 397 - -
Prci14g1520 864 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 851 IPR045211 GO:0000390
Prci14g1520 864 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1520 Prci-Chr14 22516646 22521093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1520 195 236 C2H2 Transcription Factor Family AT5G26610 47.619 3.76e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1520 K13103 - gmx:100781621 1379.39