Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1489 ATGGCACTCTTGCAAATTTCACAAGTTGTGTTTCCCAGATTGTTCCCCATTAAACTCCCACTGTACCCAATGTTTCCTTCCCTATCAATTTCTGCCTCATCCCCTGCTCTTCGCCGCAACCCCTTTTCGTTCTGTTGCTGTAGCTGCAGTTTCAGCTCCGATTCTTCTGCGGAATTCATTACCACTTCTTCAGCTAAAGTCTTCATTAAAGGGCTTTCTCTGTCAACTTCTGAAGGACTTTTGTTTAAGGCATTCTCAGAGTTTGGTGAAATTAGTCAAGTAAAGCTGCTCATGGATAAAGAATCTGGGCAGTTCCTAGGCATCGCACATATTTGGTTTGCCAGGGAAGAGTCTGCACAATTGGCTGTGGAAAAGATGAATGGAAAGTTCTTCAATGGAAGGTTTATTTATGTCAGAGTCTCAAAGCCTGGATCATCAAAAAATCGGAGGAACAAAGCTCCGTACAAGTTTTGA 474 0.4283 MALLQISQVVFPRLFPIKLPLYPMFPSLSISASSPALRRNPFSFCCCSCSFSSDSSAEFITTSSAKVFIKGLSLSTSEGLLFKAFSEFGEISQVKLLMDKESGQFLGIAHIWFAREESAQLAVEKMNGKFFNGRFIYVRVSKPGSSKNRRNKAPYKF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1489 157 SMART rrm1_1 66 139 IPR000504 GO:0003723
Prci14g1489 157 Gene3D - 43 153 IPR012677 -
Prci14g1489 157 CDD RRM_SF 67 139 - -
Prci14g1489 157 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 61 151 - -
Prci14g1489 157 SUPERFAMILY RNA-binding domain, RBD 56 151 IPR035979 GO:0003676
Prci14g1489 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 65 143 IPR000504 GO:0003723
Prci14g1489 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 136 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1489 Prci-Chr14 22307077 22309373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1489 51 142 Eukaryotic Initiation Factors Gene Family AT1G22760 23.913 6.46e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1489 - - qsa:O6P43_021635 143.28