Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1483 ATGGGAATTTCTTCGAGTAGCGGAAGAGCAAGCAATTATTTTCATAACCCACATCTTCCATCACCTTTCTATTACTCTGCAGAAGCGCCGCCGCCGCCGCAAGGCTACTATTTCACCTCAACCACGCCTTATGCACTGCAAAATAGCAACTATGTGCATCCCCCTCCTCAGACGCATATCTTCTGTTACTCAAATGCGTACAGCAATTGTTCCAATTTTGCTAATTCTATGGTGGGTAGGTTTCAGTATCCCCCATCTTATTTTGTAAATCATGCTACTGGGTGGCCTGCAATTTATCCATCGGTTGGTCCTCTCGTCTCTCCACCTCCCTATGTTGATCATCGAACGGCTAAGAAGATCAGGAATGATGTCAACGTGCATAAAGATACATTGCGGCTGGAGGTAGATGAGCATTATCCTGATCAGCGCTTGGTTTCATTCGTTTTCGATGCCTTGCATGATGGGAGCATTACGATATTCTACTTTGCAAAAGAGGAGGAAAAATGTAGGTTTGTACCATTGTTTTCCAATGTATTTGAGCCAATCAGAATCCCCTTTCAGAAAGGAGTAGGCCAGAAATTTTGTCAGCCCTCAGGAACAGGCATTGACGTAGGGTTTTTTGAGTTGGATGATCTCTCAAAACCCTCACTTGGAGATAATGTCTTTCCCCTTGTAATATGCGCTGAAACATGTTTGGCAACTTCATCAGTAGACGAAAATCTTGGCAATTCCGTGCTAGATTTTTCTCCTCACATGCAGATTACTCAAGCCATCGTTGAGAAAGGCAATGGTGATGGTTCTTTACAAGTAAAAGTAGACAGGCAGATTCTGTGGATTGATGGGGTCCGTTATGAGTTAAGAGAGTTATATGGAATAGGAGGCTCAGTAGCAGCTGGTTTTGATGACAATGATTCTGGGAAGGAGTGTGTAATATGCATGACTGAACCAAAGGACACAGCTGTATTACCTTGTCGACACTTGTGCATGTGCAGTGACTGCGCACAAGCTTTGTGGCTTCAATCGAATAAATGCCCAATATGCCGTCAATCTATCGAGGAACTTATGGAAATCAATATAAACAATGGTGATTATTGGGATCTTAGATGGTAA 1110 0.4306 MGISSSSGRASNYFHNPHLPSPFYYSAEAPPPPQGYYFTSTTPYALQNSNYVHPPPQTHIFCYSNAYSNCSNFANSMVGRFQYPPSYFVNHATGWPAIYPSVGPLVSPPPYVDHRTAKKIRNDVNVHKDTLRLEVDEHYPDQRLVSFVFDALHDGSITIFYFAKEEEKCRFVPLFSNVFEPIRIPFQKGVGQKFCQPSGTGIDVGFFELDDLSKPSLGDNVFPLVICAETCLATSSVDENLGNSVLDFSPHMQITQAIVEKGNGDGSLQVKVDRQILWIDGVRYELRELYGIGGSVAAGFDDNDSGKECVICMTEPKDTAVLPCRHLCMCSDCAQALWLQSNKCPICRQSIEELMEININNGDYWDLRW 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1483 369 PANTHER MAHOGUNIN 23 358 IPR045194 GO:0061630
Prci14g1483 369 Pfam Zinc finger, C3HC4 type (RING finger) 307 353 - -
Prci14g1483 369 SUPERFAMILY RING/U-box 303 355 - -
Prci14g1483 369 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 296 359 IPR013083 -
Prci14g1483 369 CDD mRING-HC-C3HC5_MGRN1-like 307 348 IPR045195 -
Prci14g1483 369 SMART ring_2 309 347 IPR001841 -
Prci14g1483 369 ProSiteProfiles Zinc finger RING-type profile. 309 348 IPR001841 -
Prci14g1483 369 FunFam probable E3 ubiquitin-protein ligase LOG2 293 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1483 Prci-Chr14 22197744 22200497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1483 79 363 C3H Transcription Factor Family AT3G06140 56.954 1.48e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1483 - - qsa:O6P43_021626 533.487