Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1478 ATGTCTCACATAGCTGTCGAGAGGAACAGGAGAAGACAGATGAACGAGCACCTCAAAGTTTTAAGGTCTTTGACCCCTTGTTTCTATATCAAAAGGGGAGATCAAGCATCAATAATCGGGGGAGTAATAGAGTTCATAAAAGAGCTACACCAAGTTCTGGAAGTTCTGGAATCGAAGAAAAGAAGAAGAAAGAGTGTAAGCCCTAGCCCATTATCACCATCATCAGCAAGCAGCTTGAAGGAGGATGTAGGAGCAGCAAGCTGCAATTCTTCAGTTGCAGATGTGCAAGTGAAAATCTCAGGCTCAAACGTGATCCTGAAAGTGATCTCCCACAGAATTCCAGGTCAAGTCTCAAAGATAATCACTGTTCTTGAGAGGCTATCTTTTCAAGTCCTTCATCTCAACATCAGCAGCATGGAGGATACAGTCCTATACCACTTTGTTGTTAAGATAGGGTTGGAGTGTCAGCTAAGTCTGGAGGAACTAGCAGTGGGAGTACAACAAACTTTCTGCGATGAGAAGCTGTTAACTAATGGCACAGTGTGA 546 0.4341 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLEVLESKKRRRKSVSPSPLSPSSASSLKEDVGAASCNSSVADVQVKISGSNVILKVISHRIPGQVSKIITVLERLSFQVLHLNISSMEDTVLYHFVVKIGLECQLSLEELAVGVQQTFCDEKLLTNGTV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1478 181 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Prci14g1478 181 SMART finulus 4 55 IPR011598 GO:0046983
Prci14g1478 181 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Prci14g1478 181 FunFam Transcription factor MUTE 1 67 - -
Prci14g1478 181 PANTHER TRANSCRIPTION FACTOR FAMA 1 170 IPR044283 GO:0003700|GO:0010052
Prci14g1478 181 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 64 IPR036638 GO:0046983
Prci14g1478 181 Gene3D - 1 65 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1478 Prci-Chr14 22131235 22132835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1478 1 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 62.814 8.30e-81 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci14g1478 HLH 4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1478 - - pcin:129292243 307.375