Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1450 ATGGTAGCCGGCATTGTCATTCTCTTTATTCTCCTTATGCTTCTTCTGATCATCGTCCTCATCATTTTTGCCTGCAAACCATGGCGCTTCTTTTTCTCTTCGCAACCCCGCTTATCCATCAAGGATGGTGACATAGAGAGGCCCTTAGTTGCAGACGATGCAAGTGCTTTACGTAGTCAGAGCAATGAATTGCCCCGAGAGTATGATCTTGAGGGTGCGTGCTTTTCCAATGAGGGTCCTTTTCGCTCACCTCAACCACATGGACGTATTTATAAGCAAAGGCTCCCTGCTTCTTCTCCTGATGTGCCACAAGGTGATAGCTTGATTTTAGATGTACCTTCTGATGCTCCAGAAGAAGTTGCGCTTGGTCAAACACTCAAGCTTGCCCCAGACCAGTTAGCTGAAATTCAAAAGCATACTAGAGTGACTTTTGAAGAGGATAGATTGGAAGACACTGTGCAAAGAGATATCTTAGATCAAAGAAGTTGCCTCACCCTGGAGGTTATCAGTGGTCCTTCTTGTGGCGTTCGTTGTTCTGTACAATCAACAAATCCCTCTCATCTACCACTGACAATTGGAAGAGTTTCTCCAAGTGATTTGTTGATAAAGGATTCAGAAGTGTCAGGAAAGCATGCTCTAATAAATTGGAATTTAGATAAATTGAAATGGGAGTTGGTAGATATGGGTAGCCTGAATGGAACACTTCTGAATTCTCGGTCAATCAACCATCCTGACACTAGCAACAGGCGCTGGGGTGAGCCACATGAGCTTGCCAATGGAGATATTATAACTCTTGGAACAACATCAAAAGTTGTTGTCCGTATTTCTTCTCAAAGTAGGCAGCAAATTCCATTTGGAGTAGGTATGGCATCAGATCCCATGTCTTTACGCCGAGGAGGGAAAAAGCTACCTATGGAAGATGTCTGCTATTATCAATGGCCTCTTCCTGGGCTGGATCAGGTGCTGGACTTCATTGCTCCCATTCAACCAAGGACCATTCTGTTTGGACTATTTGGCATCTGTGATGGACATGGTGGAGATGGGGCTGCTAAATCTGCTAGCAAACTTTTTCCTGAGATAGTTGCAAGCATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATCGCTACATGATGCATCAGATGTTCTTAGAGATGCGTTTTCTCAAACAGAAGCAAGCATGAATCACCATTATGAGGGATGTACAGCAACAGTGCTACTGGTGTGGGCCGGTAATGGTGAAAATTTCTATGCACAATGTGCAAATGTTGGAGACTCTTCCTGCGTTATGAATGTCAATGGAAAACAGATCAAGATGACAGAAGATCATAAGATAGCAAATCATTCTGAAAGACTCCGAATTGAAGAGAGTGGCGAGCCACTGAAAGATGGTGAAACGCGTCTTTATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAGCAGAAGGATTCCCGGTTTAGTTCAGAGCCTTATGTAAGTCAAGTGGTGCATATTGACCAAACAAGCAGGGCCTTTGCCATTCTAGCTAGTGATGGCTTGTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGGTGAGAGACAGATACTCCACACATGCAGATAATTCTGCAGAAAGGGTTGCTAATTTCTTGTTGGGTGAGGCTAGAACACAAAGAACAAAGGATAATACATGTGTAATTTTCTTAGATTTTGATAACCTTGCCAGATCCTCTTGTACATCTGAGTCCTAG 1755 0.4319 MVAGIVILFILLMLLLIIVLIIFACKPWRFFFSSQPRLSIKDGDIERPLVADDASALRSQSNELPREYDLEGACFSNEGPFRSPQPHGRIYKQRLPASSPDVPQGDSLILDVPSDAPEEVALGQTLKLAPDQLAEIQKHTRVTFEEDRLEDTVQRDILDQRSCLTLEVISGPSCGVRCSVQSTNPSHLPLTIGRVSPSDLLIKDSEVSGKHALINWNLDKLKWELVDMGSLNGTLLNSRSINHPDTSNRRWGEPHELANGDIITLGTTSKVVVRISSQSRQQIPFGVGMASDPMSLRRGGKKLPMEDVCYYQWPLPGLDQVLDFIAPIQPRTILFGLFGICDGHGGDGAAKSASKLFPEIVASILSDSLKRERVLSLHDASDVLRDAFSQTEASMNHHYEGCTATVLLVWAGNGENFYAQCANVGDSSCVMNVNGKQIKMTEDHKIANHSERLRIEESGEPLKDGETRLYGINLARMLGDKFLKQKDSRFSSEPYVSQVVHIDQTSRAFAILASDGLWDVISMKKAIQLVLQVRDRYSTHADNSAERVANFLLGEARTQRTKDNTCVIFLDFDNLARSSCTSES 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1450 584 CDD PP2Cc 298 572 IPR001932 -
Prci14g1450 584 Gene3D - 295 581 IPR036457 -
Prci14g1450 584 SUPERFAMILY SMAD/FHA domain 162 274 IPR008984 GO:0005515
Prci14g1450 584 PANTHER PROTEIN PHOSPHATASE 2C 282 568 IPR015655 GO:0004722|GO:0006470
Prci14g1450 584 SMART PP2C_4 280 570 IPR001932 -
Prci14g1450 584 FunFam Protein phosphatase 2C 70 294 579 - -
Prci14g1450 584 Pfam Protein phosphatase 2C 330 565 IPR001932 -
Prci14g1450 584 SMART FHA_2 189 241 IPR000253 GO:0005515
Prci14g1450 584 ProSiteProfiles Forkhead-associated (FHA) domain profile. 190 241 IPR000253 GO:0005515
Prci14g1450 584 FunFam Protein phosphatase 2C 70 159 293 - -
Prci14g1450 584 Pfam FHA domain 191 266 IPR000253 GO:0005515
Prci14g1450 584 ProSitePatterns PPM-type phosphatase domain signature. 337 345 IPR000222 GO:0043169
Prci14g1450 584 Gene3D - 159 294 - -
Prci14g1450 584 SUPERFAMILY PP2C-like 299 574 IPR036457 -
Prci14g1450 584 CDD FHA_PP2C70-like 164 274 - -
Prci14g1450 584 ProSiteProfiles PPM-type phosphatase domain profile. 286 572 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1450 Prci-Chr14 21703224 21711795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1450 5 573 PP2C-type Phosphatase Gene Family AT5G19280 57.383 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1450 K01090 - qsa:O6P43_003406 839.336