Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1419 ATGTTTTGTGGGGTTCCCCTTCCTGGTCCTTCAGTCATCAATTGGGCTATTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGCACTCCGGAAAAAAATGGTCATTCAGATGAAGCTTCAAGAAGTCCTGAACTCCTTCAAGAGTTCCTGAAATCTGGTCCTAGGAAGGAACTTCTTCGAATGTGCTTTTATAAAGACAGAAAGATCATATCATTGAAAAGAAAGATGCCAGAAACTAAGTCAACCAGTAAGGTAATCAAGAAACAGGACAGCAAAAAAACTTCTACTCTTAGCAACCAGCCCTCTAGGAAGCAAAATAGGAAGAGCAAAAACCCTATAAGGCTCCAGCCAGTTGCTGACCAGCTTTCTGATTTTGGACATTCAGACTGCTGGATCTGTAAAAACTCTGCTTGTAGAGCTGTTCTATCCACAGATGACAAATTTTGTAGAAGGTGCTCTTGCTGTATTTGTCACCTATTTGATAGTAACAAGGATCCTAGTCTTTGGTTGGTATGCTCATCTGAATCTGATGAAGGGGACTCCTGTGGCTTGTCTTGCCATATTGAATGTGCCCTTCAACATGAAAAAGTGGGAGTTGTTGATCATGGGCAACTGATGCAACTAGATGGCGGCTATTGTTGTGCATCCTGTGGTAAAGTTACAGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATGGCAAAAGATGCTCGGCGAGTTGATGTGCTCTGCTATAGGTTATATTTGAGTTACAAGCTCCTGGATGGGACTTCGAGGTTTAAAGAATTGCATGACACTGTACTAGAGGCAAAAGCAAAGCTAGAGACAGAAGTTGGTCCGGTCAATGGGATTTCCGCAAAGATGGTGCGAGGAATTGTCAGCAGACTCTCTATTGCCAGTGAGGTGCAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGGGTGGCCTTCTGTTGTGAATCCAGATTCTATAGATGGTTCACTTCCTGCTACCTGCAAATTTGTTTTTGAAGAGGTAACAGCTTCCTCAGTCAAAATCATCTTGATTGACATGTCCATTGCATCTTCCAAGGACATTAAGGGCTACAAGCTCTGGTACTACAAGACTAATGAGGAGCTGCTCACAAAAGATCCTGTTTGTGAGGTCCCAAAAGATCAGAAGAGGATTTTGTTATCCAACCTCCAGCCTTGCACAGAATATACTTTTCGCATTATATCGTATACGGATATGGGTCAGCTGGGTTATTCTGAAGCCAAATGTTTCACCAAGAGCGCTGATCCAACTATAAAAGGTCCCTCCTCACTAATCGATTTAGGTCAAAAAAAAGAGAGCCTTGAAATTGGAGCCAGTTCATCTGGATCCAAAACAGAGCCCAATCCTACAGTAGCAGATTTAGGATTTAAGGTTCGAGACCTTGGGAAAGTTGTGGGTCTTGCTTGGACTCAAGATCAAGGTCCCTTGGAAGGGTTTTGCAGTGTTGATACAAAAAATTGCTGCAGAGAAACTGAAATTGTCAAGCCTAAAATTTCAGACGAGCAGTTGCCTGCAGTTTCACGGGACCTTGATTTAAATGTTGTTTCAGTGCCTGATCTAAATGAAGAACTAGTACCTCCTTTTGAGTCTCCCAAGGATGAAGATAATGGCTACACTTTGCAGAAGGCTGTTGAGGCAGACGATGATGCTGCCTCTCGCTATGCACAGAAAATCAGTTTAGCAAAATCGCATGGTAGTGTTGACTCCCATACCTGGATGAACGGGCCAACCGGAGAAGTTCCAGCTGTTGATTCCCGTGTAGATGCATGCAAGAAAAGGGTAGCTAGCATCAATGAAGAGACACATGATTGCAATAGCACTTTGGCAAATGGCTCTCCTCTTGGAGTATCAGATGGCACTTGCTCCCTGGATGAAAACTATGAGTATTGTGTGAAAGTATTTCGGTGGCTAGAATGTGAGGGTCATATCAAGCAGGAGTTTCGGTTGAAGTTGCTAACATGGTTTAGTTTGAGGTCGACAGAGCAGGAACGCAGGGTTGTCAATACTTTCATTCAAACTTTACTTGATGATCCAAGTAGTTTGGCAGGACAACTGATTGACTCATTTTCCGATATCATATCCAACAAGAGGCCCAGGAATGGATAG 2145 0.4317 MFCGVPLPGPSVINWAISGVQSLSSSVQSTPEKNGHSDEASRSPELLQEFLKSGPRKELLRMCFYKDRKIISLKRKMPETKSTSKVIKKQDSKKTSTLSNQPSRKQNRKSKNPIRLQPVADQLSDFGHSDCWICKNSACRAVLSTDDKFCRRCSCCICHLFDSNKDPSLWLVCSSESDEGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNMAKDARRVDVLCYRLYLSYKLLDGTSRFKELHDTVLEAKAKLETEVGPVNGISAKMVRGIVSRLSIASEVQKLCSLAIEKADGWPSVVNPDSIDGSLPATCKFVFEEVTASSVKIILIDMSIASSKDIKGYKLWYYKTNEELLTKDPVCEVPKDQKRILLSNLQPCTEYTFRIISYTDMGQLGYSEAKCFTKSADPTIKGPSSLIDLGQKKESLEIGASSSGSKTEPNPTVADLGFKVRDLGKVVGLAWTQDQGPLEGFCSVDTKNCCRETEIVKPKISDEQLPAVSRDLDLNVVSVPDLNEELVPPFESPKDEDNGYTLQKAVEADDDAASRYAQKISLAKSHGSVDSHTWMNGPTGEVPAVDSRVDACKKRVASINEETHDCNSTLANGSPLGVSDGTCSLDENYEYCVKVFRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLLDDPSSLAGQLIDSFSDIISNKRPRNG 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1419 714 ProSiteProfiles Fibronectin type-III domain profile. 332 429 IPR003961 GO:0005515
Prci14g1419 714 Pfam PHD - plant homeodomain finger protein 134 252 IPR032881 -
Prci14g1419 714 MobiDBLite consensus disorder prediction 93 107 - -
Prci14g1419 714 SUPERFAMILY Fibronectin type III 338 425 IPR036116 GO:0005515
Prci14g1419 714 CDD FN3 360 424 IPR003961 GO:0005515
Prci14g1419 714 PANTHER VIN3-LIKE PROTEIN 2-RELATED 23 714 IPR044514 GO:0010048|GO:0040029
Prci14g1419 714 Gene3D Immunoglobulins 330 435 IPR013783 -
Prci14g1419 714 Pfam Fibronectin type III domain 337 417 IPR003961 GO:0005515
Prci14g1419 714 MobiDBLite consensus disorder prediction 26 45 - -
Prci14g1419 714 CDD PHD_VIN3_plant 154 218 - -
Prci14g1419 714 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1419 Prci-Chr14 21219709 21227037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1419 132 714 PHD Gene Family AT3G24440 47.270 1.34e-172 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1419 - - gmx:100780157 1090.49