Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1418 ATGGAATTAGAAGAAAAGTTCCTTGTTAAAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGCACTCCGGAAAAAAATGGTCATTCAGATGAAGCTTCAAGAAGTCCTGAACTCCTTCAAGAGTTCCTGAAATCTGGTCCTAGGAAGGAACTTCTTCGAATGTGCTTTTATAAAGACAGAAAGATCATATCATTGAAAAGAAAGATGCCAGAAACTAAGTCAACCAGTAAGGTAATCAAGAAACAGGACAGCAAAAAAACTTCTACTCTTAGCAACCAGCCCTCTAGGAAGCAAAATAGGAAGAGCAAAAACCCTATAAGGCTCCAGCCAGTTGCTGACCAGCTTTCTGATTTTGGACATTCAGACTGCTGGATCTGTAAAAACTCTGCTTGTAGAGCTGTTCTATCCACAGATGACAAATTTTGTAGAAGGTGCTCTTGCTGTATTTGTCACCTATTTGATAGTAACAAGGATCCTAGTCTTTGGTTGGTATGCTCATCTGAATCTGATGAAGGGGACTCCTGTGGCTTGTCTTGCCATATTGAATGTGCCCTTCAACATGAAAAAGTGGGAGTTGTTGATCATGGGCAACTGATGCAACTAGATGGCGGCTATTGTTGTGCATCCTGTGGTAAAGTTACAGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATGGCAAAAGATGCTCGGCGAGTTGATGTGCTCTGCTATAGGTTATATTTGAGTTACAAGCTCCTGGATGGGACTTCGAGGTTTAAAGAATTGCATGACACTGTACTAGAGGCAAAAGCAAAGCTAGAGACAGAAGTTGGTCCGGTCAATGGGATTTCCGCAAAGATGGTGCGAGGAATTGTCAGCAGACTCTCTATTGCCAGTGAGGTGCAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGGGTGGCCTTCTGTTGTGAATCCAGATTCTATAGATGGTTCACTTCCTGCTACCTGCAAATTTGTTTTTGAAGAGGTAACAGCTTCCTCAGTCAAAATCATCTTGATTGACATGTCCATTGCATCTTCCAAGGACATTAAGGGCTACAAGCTCTGGTACTACAAGACTAATGAGGAGCTGCTCACAAAAGATCCTGTTTGTGAGGTCCCAAAAGATCAGAAGAGGATTTTGTTATCCAACCTCCAGCCTTGCACAGAATATACTTTTCGCATTATATCGTATACGGATATGGGTCAGCTGGGTTATTCTGAAGCCAAATGTTTCACCAAGAGCGCTGATCCAACTATAAAAGGTCCCTCCTCACTAATCGATTTAGGTCAAAAAAAAGAGAGCCTTGAAATTGGAGCCAGTTCATCTGGATCCAAAACAGAGCCCAATCCTACAGTAGCAGATTTAGGATTTAAGGTTCGAGACCTTGGGAAAGTTGTGGGTCTTGCTTGGACTCAAGATCAAGGTCCCTTGGAAGGGTTTTGCAGTGTTGATACAAAAAATTGCTGCAGAGAAACTGAAATTGTCAAGCCTAAAATTTCAGACGAGCAGTTGCCTGCAGTTTCACGGGACCTTGATTTAAATGTTGTTTCAGTGCCTGATCTAAATGAAGAACTAGTACCTCCTTTTGAGTCTCCCAAGGATGAAGATAATGGCTACACTTTGCAGAAGGCTGTTGAGGCAGACGATGATGCTGCCTCTCGCTATGCACAGAAAATCAGTTTAGCAAAATCGCATGGTAGTGTTGACTCCCATACCTGGATGAACGGGCCAACCGGAGAAGTTCCAGCTGTTGATTCCCGTGTAGATGCATGCAAGAAAAGGGTAGCTAGCATCAATGAAGAGACACATGATTGCAATAGCACTTTGGCAAATGGCTCTCCTCTTGGAGTATCAGATGGCACTTGCTCCCTGGATGAAAACTATGAGTATTGTGTGAAAGTATTTCGGTGGCTAGAATGTGAGGGTCATATCAAGCAGGAGTTTCGGTTGAAGTTGCTAACATGGTTTAGTTTGAGGTCGACAGAGCAGGAACGCAGGGTTGTCAATACTTTCATTCAAACTTTACTTGATGATCCAAGTAGTTTGGCAGGACAACTGATTGACTCATTTTCCGATATCATATCCAACAAGAGGCCCAGGAATGGATAG 2127 0.4283 MELEEKFLVKVSGVQSLSSSVQSTPEKNGHSDEASRSPELLQEFLKSGPRKELLRMCFYKDRKIISLKRKMPETKSTSKVIKKQDSKKTSTLSNQPSRKQNRKSKNPIRLQPVADQLSDFGHSDCWICKNSACRAVLSTDDKFCRRCSCCICHLFDSNKDPSLWLVCSSESDEGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNMAKDARRVDVLCYRLYLSYKLLDGTSRFKELHDTVLEAKAKLETEVGPVNGISAKMVRGIVSRLSIASEVQKLCSLAIEKADGWPSVVNPDSIDGSLPATCKFVFEEVTASSVKIILIDMSIASSKDIKGYKLWYYKTNEELLTKDPVCEVPKDQKRILLSNLQPCTEYTFRIISYTDMGQLGYSEAKCFTKSADPTIKGPSSLIDLGQKKESLEIGASSSGSKTEPNPTVADLGFKVRDLGKVVGLAWTQDQGPLEGFCSVDTKNCCRETEIVKPKISDEQLPAVSRDLDLNVVSVPDLNEELVPPFESPKDEDNGYTLQKAVEADDDAASRYAQKISLAKSHGSVDSHTWMNGPTGEVPAVDSRVDACKKRVASINEETHDCNSTLANGSPLGVSDGTCSLDENYEYCVKVFRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLLDDPSSLAGQLIDSFSDIISNKRPRNG 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1418 708 PANTHER VIN3-LIKE PROTEIN 2-RELATED 17 708 IPR044514 GO:0010048|GO:0040029
Prci14g1418 708 ProSiteProfiles Fibronectin type-III domain profile. 326 423 IPR003961 GO:0005515
Prci14g1418 708 SUPERFAMILY Fibronectin type III 332 419 IPR036116 GO:0005515
Prci14g1418 708 Pfam Fibronectin type III domain 331 411 IPR003961 GO:0005515
Prci14g1418 708 CDD FN3 354 418 IPR003961 GO:0005515
Prci14g1418 708 MobiDBLite consensus disorder prediction 87 101 - -
Prci14g1418 708 Gene3D Immunoglobulins 324 429 IPR013783 -
Prci14g1418 708 MobiDBLite consensus disorder prediction 12 28 - -
Prci14g1418 708 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Prci14g1418 708 MobiDBLite consensus disorder prediction 11 40 - -
Prci14g1418 708 CDD PHD_VIN3_plant 148 212 - -
Prci14g1418 708 MobiDBLite consensus disorder prediction 74 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1418 Prci-Chr14 21217759 21227037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1418 126 708 PHD Gene Family AT3G24440 47.270 4.45e-173 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1418 - - gmx:100780157 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1418 14 21217759 21227037 Prci14g1418 14 21217759 21227037 ECH