Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1417 ATGGCAAATCGACTAAAGGAAGATGAGAAAAATGAGCGAATAATTCGAGGTCTTCTCAAACTACCAGCGAATCGCAGATGTATTAATTGCAACAGTCTGGGGCCGCAATATGTATGCACAAATTTCTGGACATTTGTTTGCACAAGCTGTAGTGGAATACACCGGGAATTTACGCATCGAGTAAAGTCAATATCAATGGCCAAGTTCACTTCGCAAGAAGTTAGTGCACTTCAGGAAGGAGGGAATCAGCATGCAAAAGAAGTTTATTTTAAACAATGGGATCCTAAAAGTTATTCTCTCCCTGATAACAGTAATGTTGGCAGGCTCCGCAACTTTATTAAACAAGTTTATGTGGATAAAAGATTCACTGTTGAGAGGACCTATGACAAATCACAGAGAGTAAATACAGGTGACAAGGATCATTTCTCTGAAAACTCGAGAGTTCAATCATATCAGGGTGGTCCTAAAAGCCCACCATATGATGACACATATAAACACCAATATAGTGACAGCTCTAGTCTAGGTGGAAGAAGTCCTGGGCATGATCAAGAAAGTAGGGAGTATAGTAATGATAAGAGAAGTCTTAGTCATCCTCCAATTATCAACGATTGGCGCCAAGAAGATAGAGTTGGAGATGAGAGGAGGTTTGAAGGTCGTAGAGGATCTGATGGAGATTATAAGCTGGAAGGCCAATTGCCTGGGCAAGCCAACAAGCTAGATTCTTCAAGTCCACCTGTGGTTCGGTCTGTCAGAGATATTTTGGGAGAAAATGCAGTTCCTCTTGAAATAAATGGAACCCCTGAAACAAATAGTGGAAAAGCTAATGATGGCTCAGCTCTCACACAGAGGACTGTATCTTCCAGTAGCTTCGCATCCAGCATTGGAAACCCTGCAGAAGTTAAGCTTGAGACTACTAAGAGCCTGATTGATTTTGATGATGAGCCTGAGCCTCGGGTAGATCCAGCAATTACTTACATCCAACAAACTACCACACAATCCATTGCAGAGCAACCAAATTCCAGAGATGACAATAATTGGGCCTCTTTTGATGTGACCCCACAAGCAAAAGCAACTCAAACTCCTTCAAATGTAAATGCACTGGAATCCATGCTTTCCCAATTGTCAGTATCATCATCATTACCAGCTCATGCTCCTCAAGTCCAACATGGTTCCAGTGTTGTAACACCTGTTCCTGGGAGGAGTATGACATTACAAAGAACTGGGAACCTATCTGTTTCACCTGCTGGGCCTGCACCAGCACCATCTCTTACTGCTACTGCCGTTGGAGCTGCAACTATTAGCAGCTTTGCGACTTTTCCATCCGGTGGTTCTTCAGCATTGCAGCATCCACAGCCTTTGTTCCCTCCCAATGTTGGTCAGTCTTTGACTCATCAGTCTACACCACAACCAATAGGAGAATCGAATAATCAGCCATGGAGTATGCCTCCAGCTCCAACAATACATGGCCATCCGAGCATGTCACTGCCACATGTATCCCATCTTATCTCTAAGCCTGCTACTGAGACTAGCTCCAGTGCTGCTCCAGGACTGTCTGTTGAAGTAAAACAAGTGGAAGAAAAGAACTTCCTGAGGATCTTTTTACTGTAA 1608 0.4341 MANRLKEDEKNERIIRGLLKLPANRRCINCNSLGPQYVCTNFWTFVCTSCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQHAKEVYFKQWDPKSYSLPDNSNVGRLRNFIKQVYVDKRFTVERTYDKSQRVNTGDKDHFSENSRVQSYQGGPKSPPYDDTYKHQYSDSSSLGGRSPGHDQESREYSNDKRSLSHPPIINDWRQEDRVGDERRFEGRRGSDGDYKLEGQLPGQANKLDSSSPPVVRSVRDILGENAVPLEINGTPETNSGKANDGSALTQRTVSSSSFASSIGNPAEVKLETTKSLIDFDDEPEPRVDPAITYIQQTTTQSIAEQPNSRDDNNWASFDVTPQAKATQTPSNVNALESMLSQLSVSSSLPAHAPQVQHGSSVVTPVPGRSMTLQRTGNLSVSPAGPAPAPSLTATAVGAATISSFATFPSGGSSALQHPQPLFPPNVGQSLTHQSTPQPIGESNNQPWSMPPAPTIHGHPSMSLPHVSHLISKPATETSSSAAPGLSVEVKQVEEKNFLRIFLL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1417 535 CDD ArfGap_AGFG 12 124 - -
Prci14g1417 535 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Prci14g1417 535 MobiDBLite consensus disorder prediction 164 179 - -
Prci14g1417 535 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Prci14g1417 535 MobiDBLite consensus disorder prediction 441 497 - -
Prci14g1417 535 MobiDBLite consensus disorder prediction 382 412 - -
Prci14g1417 535 MobiDBLite consensus disorder prediction 202 226 - -
Prci14g1417 535 Gene3D Arf GTPase activating protein 1 135 IPR038508 -
Prci14g1417 535 MobiDBLite consensus disorder prediction 382 419 - -
Prci14g1417 535 MobiDBLite consensus disorder prediction 132 246 - -
Prci14g1417 535 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Prci14g1417 535 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Prci14g1417 535 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Prci14g1417 535 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Prci14g1417 535 PANTHER ARFGAP/RECO-RELATED 1 515 IPR044820 GO:0005096
Prci14g1417 535 SMART arf_gap_3 12 131 IPR001164 GO:0005096
Prci14g1417 535 MobiDBLite consensus disorder prediction 441 482 - -
Prci14g1417 535 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1417 Prci-Chr14 21052707 21057450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1417 12 122 C2H2 Transcription Factor Family AT4G05330 34.188 4.66e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1417 - - pcin:129293359 1055.43