LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g1415	ATGGCAAATCGACTAAAGGAAGATGAGAAAAATGAGCGAATAATTCGAGGTCTTCTCAAACTACCAGCGAATCGCAGATGTATTAATTGCAACAGTCTGGGGCCGCAATATGTATGCACAAATTTCTGGACATTTGTTTGCACAAGCTGTAGTGGAATACACCGGGAATTTACGCATCGAGTAAAGTCAATATCAATGGCCAAGTTCACTTCGCAAGAAGTTAGTGCACTTCAGGAAGGAGGGAATCAGCATGCAAAAGAAGTTTATTTTAAACAATGGGATCCTAAAAGTTATTCTCTCCCTGATAACAGTAATGTTGGCAGGCTCCGCAACTTTATTAAACAAGTTTATGTGGATAAAAGATTCACTGTTGAGAGGACCTATGACAAATCACAGAGAGGTGACAAGGATCATTTCTCTGAAAACTCGAGAGTTCAATCATATCAGGGTGGTCCTAAAAGCCCACCATATGATGACACATATAAACACCAATATAGTGACAGCTCTAGTCTAGGTGGAAGAAGTCCTGGGCATGATCAAGAAAGTAGGGAGTATAGTAATGATAAGAGAAGTCTTAGTCATCCTCCAATTATCAACGATTGGCGCCAAGAAGATAGAGTTGGAGATGAGAGGAGGTTTGAAGGTCGTAGAGGATCTGATGGAGATTATAAGCTGGAAGGCCAATTGCCTGGGCAAGCCAACAAGCTAGATTCTTCAAGTCCACCTGTGGTTCGGTCTGTCAGAGATATTTTGGGAGAAAATGCAGTTCCTCTTGAAATAAATGGAACCCCTGAAACAAATAGTGGAAAAGCTAATGATGGCTCAGCTCTCACACAGAGGACTGTATCTTCCAGTAGCTTCGCATCCAGCATTGGAAACCCTGCAGAAGTTAAGCTTGAGACTACTAAGAGCCTGATTGATTTTGATGATGAGCCTGAGCCTCGGGTAGATCCAGCAATTACTTACATCCAACAAACTACCACACAATCCATTGCAGAGCAACCAAATTCCAGAGATGACAATAATTGGGCCTCTTTTGATGTGACCCCACAAGCAAAAGCAACTCAAACTCCTTCAAATGTAAATGCACTGGAATCCATGCTTTCCCAATTGTCAGTATCATCATCATTACCAGCTCATGCTCCTCAAGTCCAACATGGTTCCAGTGTTGTAACACCTGTTCCTGGGAGGAGTATGACATTACAAAGAACTGGGAACCTATCTGTTTCACCTGCTGGGCCTGCACCAGCACCATCTCTTACTGCTACTGCCGTTGGAGCTGCAACTATTAGCAGCTTTGCGACTTTTCCATCCGGTGGTTCTTCAGCATTGCAGCATCCACAGCCTTTGTTCCCTCCCAATGTTGGTCAGTCTTTGACTCATCAGTCTACACCACAACCAATAGGAGAATCGAATAATCAGCCATGGAGTATGCCTCCAGCTCCAACAATACATGGCCATCCGAGCATGTCACTGCCACATGTATCCCATCTTATCTCTAAGCCTGCTACTGAGACTAGCTCCAGTGCTGCTCCAGGACTGTCTGTTGAAGTAAAACAAGTGGAAGAAAAGAACTTCCTGAGGATCTTTTTACTGTAA	1599	0.4353	MANRLKEDEKNERIIRGLLKLPANRRCINCNSLGPQYVCTNFWTFVCTSCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQHAKEVYFKQWDPKSYSLPDNSNVGRLRNFIKQVYVDKRFTVERTYDKSQRGDKDHFSENSRVQSYQGGPKSPPYDDTYKHQYSDSSSLGGRSPGHDQESREYSNDKRSLSHPPIINDWRQEDRVGDERRFEGRRGSDGDYKLEGQLPGQANKLDSSSPPVVRSVRDILGENAVPLEINGTPETNSGKANDGSALTQRTVSSSSFASSIGNPAEVKLETTKSLIDFDDEPEPRVDPAITYIQQTTTQSIAEQPNSRDDNNWASFDVTPQAKATQTPSNVNALESMLSQLSVSSSLPAHAPQVQHGSSVVTPVPGRSMTLQRTGNLSVSPAGPAPAPSLTATAVGAATISSFATFPSGGSSALQHPQPLFPPNVGQSLTHQSTPQPIGESNNQPWSMPPAPTIHGHPSMSLPHVSHLISKPATETSSSAAPGLSVEVKQVEEKNFLRIFLL	532

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g1415	532	CDD	ArfGap_AGFG	12	124	-	-
	Prci14g1415	532	SUPERFAMILY	ArfGap/RecO-like zinc finger	11	124	IPR037278	-
	Prci14g1415	532	MobiDBLite	consensus disorder prediction	199	223	-	-
	Prci14g1415	532	ProSiteProfiles	ARF GTPase-activating proteins domain profile.	12	130	IPR001164	GO:0005096
	Prci14g1415	532	PANTHER	ARFGAP/RECO-RELATED	1	512	IPR044820	GO:0005096
	Prci14g1415	532	Pfam	Putative GTPase activating protein for Arf	13	124	IPR001164	GO:0005096
	Prci14g1415	532	SMART	arf_gap_3	12	131	IPR001164	GO:0005096
	Prci14g1415	532	MobiDBLite	consensus disorder prediction	128	243	-	-
	Prci14g1415	532	MobiDBLite	consensus disorder prediction	128	142	-	-
	Prci14g1415	532	MobiDBLite	consensus disorder prediction	438	494	-	-
	Prci14g1415	532	Gene3D	Arf GTPase activating protein	1	134	IPR038508	-
	Prci14g1415	532	MobiDBLite	consensus disorder prediction	384	409	-	-
	Prci14g1415	532	MobiDBLite	consensus disorder prediction	384	416	-	-
	Prci14g1415	532	MobiDBLite	consensus disorder prediction	438	479	-	-
	Prci14g1415	532	MobiDBLite	consensus disorder prediction	161	176	-	-
	Prci14g1415	532	FunFam	Arf-GAP domain and FG repeat-containing protein 1	1	134	-	-
	Prci14g1415	532	PRINTS	HIV Rev interacting protein signature	24	43	IPR001164	GO:0005096
	Prci14g1415	532	PRINTS	HIV Rev interacting protein signature	43	60	IPR001164	GO:0005096
	Prci14g1415	532	PRINTS	HIV Rev interacting protein signature	61	82	IPR001164	GO:0005096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g1415	Prci-Chr14	21052707	21057450	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g1415	12	122	C2H2 Transcription Factor Family	AT4G05330	34.188	4.66e-12	65.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g1415	-		-	pcin:129293359	1044.26