Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1397 ATGGCAAGTTTATCTGATATTGATGTCCATTCTCATCCCTTCTCCAACATTCCAACCATAAAGTTCACCAAACTTTTCATCAATGGACAATTCGTTGATTCCATTTCAGGAAAGACATTTGAGACTGTGGACCCAAGAACAGAGGAAGTGATCACCGAAATAGCAGAGGGGACTGAAGAAGACGTTGATCTCGCCGCGAAGGCGGCACGTGAGGCTTTCGATTCTGGTCCATGGCCACGCATGACCGGCTCTGAGAGAGCGAAGATAATGATGAGATGGGCCGATCTAATTGAAGAGAACGTAGAGGAGATAGCTGCGTTGGACACCATTGATGGGGGTAAGCTATACACGACATGTAAGGCGGTAGACATTCCCCATGTAGCTAGTCTTCTTCGTTACTATGCGGGTGCTGCGGATAAGATTCATGGAGAGGTGTTGAAATCGTCAAGGAATCTTCACGCTTATACTTTAATGGAACCTATTGGTGTTGTTGGCCATATCATCCCCTGGAATTTCCCTACCCACATGTTCTTCGCCAAAGTTAGCCCTGCCTTGGCTGCTGGCTGCACCATGGTCCTTAAACCTGCTGAGCAAACTCCTCTCACTGCTCTCTTTTATGCCCACCTTTCCAAGCTGGCTGGAATCCCAGACGGGGTGCTCAATGTGATAACTGGGTTTGGCCGGACTGCAGGGGCTGCAATAAGCTCTCACATGAACATTGATGCGGTGAGTTTTACCGGTTCAACAGAAACTGGTCGTCAAGTAATGCAGGCAGCAGCCATGAGTAATTTGAAGCCAGTTTCCCTGGAATTGGGAGGCAAGTCGCCCCTCATAATTTTCAATGATGCTGATGTTGACAAGGCTGTTGACCTGGCCCTCTTTGGCATCCTTTGCAACAAGGGAGAGGTTTGTGTTGCAGGTTCCCGAGTTTTTGTTCAGGAAGGGATCTACGAGGAATTTGAGAAGAAGGTGGTGGAAAAGGCAAAAGCTTGGGTAGTGGGAGATCCTTTTGATCCTAAAGTTCAGCAAGGACCACAGGTTGACAAGAAGCAATTTGATAAAATTCTTTCATATATTGAGCATGGAAAGAGAGAAGGAGCCACCTTGTTGTCTGGGGGTAAGCGAGTGGGCAATAAGGGATACTATATTGAACCTACAATTTTCACCAATGTCAAGGACGACATGATAATAGCGCAGGATGAAATATTTGGGCCTGTGATGACACTCTTCAAGTTCGAGAACATTGCCGATGCAATAAGGAGTGCCAACAACACCAGATATGGCCTAGCAGCTGGGATTGTGACGAAGGACTTGGATATAGCAAACACAGTGTCAAGGCACATTCGCGCAGGCATTGTTTGGATCAACTGCTATTTTGCCTTTGATAATGACTTCCCTTATGGAGGGTACAAGATGAGCGGATTTGGAAGGGATTATGGACTCCATGCCCTTCATAAGTATCTTCAAGTCAAATCTGTTGTAACTCCTATTTACAATTCTCCTTGGCTTTGA 1512 0.463 MASLSDIDVHSHPFSNIPTIKFTKLFINGQFVDSISGKTFETVDPRTEEVITEIAEGTEEDVDLAAKAAREAFDSGPWPRMTGSERAKIMMRWADLIEENVEEIAALDTIDGGKLYTTCKAVDIPHVASLLRYYAGAADKIHGEVLKSSRNLHAYTLMEPIGVVGHIIPWNFPTHMFFAKVSPALAAGCTMVLKPAEQTPLTALFYAHLSKLAGIPDGVLNVITGFGRTAGAAISSHMNIDAVSFTGSTETGRQVMQAAAMSNLKPVSLELGGKSPLIIFNDADVDKAVDLALFGILCNKGEVCVAGSRVFVQEGIYEEFEKKVVEKAKAWVVGDPFDPKVQQGPQVDKKQFDKILSYIEHGKREGATLLSGGKRVGNKGYYIEPTIFTNVKDDMIIAQDEIFGPVMTLFKFENIADAIRSANNTRYGLAAGIVTKDLDIANTVSRHIRAGIVWINCYFAFDNDFPYGGYKMSGFGRDYGLHALHKYLQVKSVVTPIYNSPWL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1397 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Prci14g1397 503 Pfam Aldehyde dehydrogenase family 32 493 IPR015590 GO:0016491
Prci14g1397 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Prci14g1397 503 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 27 290 - -
Prci14g1397 503 SUPERFAMILY ALDH-like 16 499 IPR016161 GO:0016491
Prci14g1397 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Prci14g1397 503 FunFam Aldehyde dehydrogenase, putative 465 491 - -
Prci14g1397 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 18 493 - -
Prci14g1397 503 FunFam Aldehyde dehydrogenase3 273 462 - -
Prci14g1397 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1397 Prci-Chr14 20727936 20731190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1397 17 503 Aldehyde Dehydrogenase Gene Family AT3G24503 70.492 0.0 733