Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1381 ATGGAGCAGAACGACGTGATTCCACCCTTCGTTATAAAGACTTTCCATATGGTCAGCGATCCCGCCACCGATGCTCTCATCACTTGGGGTCCAGCCAACAATAGCTTCATCGTCGTCGATCCTCTGGATTTCTCCCAGACGATCCTACCTGTATATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGTCAGCTAAACACCTACGGGTTTAGAAAAGTGGATCCAGATCGATGGGAATTCGCGAACGAGTGGTTCCTTCGGGGGCAGAAGCACTTGTTGAAGAATATCGTGAGGAGGAAACAAAGTAGGATCAGTAGCTCTCATGACGAGGTGGACGACGACGCGTTGATGACGGAGATAGCGAGGTTGAAGGAAGAGCAGAAATCGTTGGAGGAAGAGCTTCAAGGGATGAATAAGAGGTTGGAGACAACAGAGAAACGACCCCAACAAATGATGGCGTTTCTGTGCAAAGTCGTGGAGGACCCAGACGTCCTCTCTCGTATTTTGCTAGAGAAGGAGCAGAAGCAACTGACAGAGAAGAAGCGGCGGCTGATGACATCATCGCCGTCGTCTTCGTCCGGTATGGCGTCGGCGGTGAAGACCGAATTTGAGGAAGAGGATGCTGCTTTGGGTGCGATAATATCTTCGCCGTCGCCGGAAACGACTACTGGACTTGAGTTTGGTCGTTATAACAGTCAGGCATCGCCAATGGAGGAAACAATAATCAACGGCCCCGATACAACATCGGGTTGGTGGAGCGAGAGAAACGACACTATAATGGGGAGGCCTCGGATAAATCAATTACAAGCTCATAATTATTGCAACTCTGGGTTAAGCCCGTTGACGGCGGTTGTGGCGGCGAGAATGGATGAGAAAGCGGCGATGTCGATGTCGGCGCGTGAGGGAGAAAGCAACTCGGCGAGCGAGGGGCAAACGAGCTACTATTTTACAGAAATGGCGGTGGAGAGCAGTTCACGGCCAACTTATCCATTTTCGCTGTTGGAAGGTGGCTTCTAG 1017 0.5084 MEQNDVIPPFVIKTFHMVSDPATDALITWGPANNSFIVVDPLDFSQTILPVYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLKNIVRRKQSRISSSHDEVDDDALMTEIARLKEEQKSLEEELQGMNKRLETTEKRPQQMMAFLCKVVEDPDVLSRILLEKEQKQLTEKKRRLMTSSPSSSSGMASAVKTEFEEEDAALGAIISSPSPETTTGLEFGRYNSQASPMEETIINGPDTTSGWWSERNDTIMGRPRINQLQAHNYCNSGLSPLTAVVAARMDEKAAMSMSAREGESNSASEGQTSYYFTEMAVESSSRPTYPFSLLEGGF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1381 338 FunFam Heat shock transcription factor 1 3 100 - -
Prci14g1381 338 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 206 IPR027725 -
Prci14g1381 338 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g1381 338 Gene3D - 2 100 IPR036388 -
Prci14g1381 338 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g1381 338 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g1381 338 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g1381 338 Coils Coil 113 147 - -
Prci14g1381 338 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Prci14g1381 338 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g1381 338 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1381 Prci-Chr14 19646854 19648360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1381 6 192 HSF AT3G24520 69.110 2.51e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci14g1381 HSF_DNA-bind 2.3e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1381 K09419 - qsa:O6P43_007930 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1381 14 19646854 19648360 Prci14g1381 14 19646854 19648360 ECH