Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1374 ATGTCAGCGACACCGTCCCCGGGAGCTGCTCCGGCGCCCACGTCGCCGCCAGCGCCGGCATCCAACGCTACCTCTCCTCCGCCCGCTGCTTCAGCTCCGCCACCGTCCACTCCTTCCGCGCCACCGCCAGCTACACCCCCTGCTCCACCGCCGGCGACTCCTTCGGCTTCTCCTCCACCCCCAGCTACGCCTTCTCTGAGCCCACCTTCTCCTTCCCCTCCGTCTTCTTCCACGCCGTCGACTTCGCCACCACCGGAATCTCCGGCGTCGCCTTCTCCACCGTCCAGTAGCAACTCTCCACCGAGTCCGCCGAGTCGGAGCTCGCCGCCGCCTCCGTCGAGCTCAAATTCGCCTTCGACTCCGAATCGAAGTCCCCCACCACCGTCGTCAAAAACGCCGCCGTCTCCGTCTTCTTCCTCGTCCTCGTCGAGTAATATATCAACTGGCGTTGTTGTCGCAATCGCTGTAGGGGCTGTGGCGATCCTTCTTGTATTAAGTATTCTCTGCGTTTGCTGTAGAAAGAAAAAGAGAAGACGCGATGAGGAATACTATGTGCCGCCGCCGGTACCTCCTCAGGGACCCAAAGTTGATCCATATGGTGGCCCACAGCGTCAATGGCAACACAATGCTCCCCCTCCTTCAGATCATATGGTCTCAGTAATGCCAAAGCCATCGCCCCCGCCACCACCAGTTGCATCACGGCCTGCCCAGTTACCCGTTTATGCTCCTCCACCGCCACCACCAGCTTTCATAAGCAGCAGTGGTGGGTCTGGCTCTAACTATTCAGGCAGTGAAAACATTCTCCCGCCTCCTTCTCCTGGCTTTGCACTGGGTTTCTCGAAGAGTACATTTACATATGAGGAGCTAGCCCGAGCAACAGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGTTACGTGCATAGAGGCATTCTTCCGAATGGAAAGGAGGTGGCTGTGAAGCAGCTAAAGGCTGGAAGTGGCCAGGGGGAGCGTGAGTTTCAAGCTGAAGTTGAGATCATTAGTCGGGTTCATCACAAACATCTTGTTTCTCTGGTTGGATACTGCATTACTGGAACAAAGAGGTTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAGTTTCACTTGCACGGAAAAGGGAGGCCTACCATGGACTGGCCCACAAGACTAAAAATTGCTTTAGGATCAGCAAAAGGACTGGCTTATCTTCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTTCTAACATACTCTTGGATTTTAAGTTTGAAGCAAAGGTGGCAGATTTTGGACTTGCAAAGTTTACATCTGATGTTAATACTCATGTTTCCACTCGAGTGATGGGGACATTTGGTTATCTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACGGACAAATCAGATGTTTTCTCCTTTGGAGTTATGCTTTTGGAGTTAATTACTGGACGCCGACCAGTTGATTCAAGTCAAACTTTTATGGAGGATAGTTTGGTAGACTGGGCAAGGCCTGTACTTACTCGTGCTTTGGAAGATGAAAATTTCGATTCTGTGGTTGATCCAAGGCTCCAACATGAATATGACCTCAATGAGATGGCTCGTATGGTGGCATGCGCTGCAGCTTGCATACGCCATTCAGCAAAACGCAGGCCAAGGATGAGCCAGGTTGTTCGCGCTCTAGAAGGAGATGTGTCTCTAGCAGACCTTAACGAGGGCATTAAGCCGGGCCATAGCTCTGTCTACAGCTCTCATGGAAGTTCAGATTATGACACAGCTCAATACAAGGAGGACATGAAAAAGTTCAGAAAAGTGGCGTATGGAGGAGGAACCAATGAGTATGGTGCCAGCAGTGAATACAGCGGACCACCCACGAGTGAGTATGGGTTGTACCCTTCTGGCTCAAGCAGTGAAGGCCAGAGTCGCCAGACAACGAGGGAAATGGAAATGAGAAAGATGAAGAACAGCCAAGGTTTCAGTGGAAATTCGTAA 2016 0.5159 MSATPSPGAAPAPTSPPAPASNATSPPPAASAPPPSTPSAPPPATPPAPPPATPSASPPPPATPSLSPPSPSPPSSSTPSTSPPPESPASPSPPSSSNSPPSPPSRSSPPPPSSSNSPSTPNRSPPPPSSKTPPSPSSSSSSSSNISTGVVVAIAVGAVAILLVLSILCVCCRKKKRRRDEEYYVPPPVPPQGPKVDPYGGPQRQWQHNAPPPSDHMVSVMPKPSPPPPPVASRPAQLPVYAPPPPPPAFISSSGGSGSNYSGSENILPPPSPGFALGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTKRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSSQTFMEDSLVDWARPVLTRALEDENFDSVVDPRLQHEYDLNEMARMVACAAACIRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHGSSDYDTAQYKEDMKKFRKVAYGGGTNEYGASSEYSGPPTSEYGLYPSGSSSEGQSRQTTREMEMRKMKNSQGFSGNS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1374 671 SUPERFAMILY Protein kinase-like (PK-like) 276 569 IPR011009 -
Prci14g1374 671 MobiDBLite consensus disorder prediction 621 671 - -
Prci14g1374 671 MobiDBLite consensus disorder prediction 622 651 - -
Prci14g1374 671 PRINTS Proline rich extensin signature 22 43 - -
Prci14g1374 671 PRINTS Proline rich extensin signature 43 59 - -
Prci14g1374 671 PRINTS Proline rich extensin signature 4 16 - -
Prci14g1374 671 PRINTS Proline rich extensin signature 61 78 - -
Prci14g1374 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Prci14g1374 671 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 157 629 IPR047117 -
Prci14g1374 671 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Prci14g1374 671 FunFam Proline-rich receptor-like protein kinase PERK1 372 580 - -
Prci14g1374 671 Gene3D Transferase(Phosphotransferase) domain 1 372 579 - -
Prci14g1374 671 MobiDBLite consensus disorder prediction 217 251 - -
Prci14g1374 671 ProSiteProfiles Protein kinase domain profile. 296 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g1374 671 FunFam proline-rich receptor-like protein kinase PERK1 274 371 - -
Prci14g1374 671 MobiDBLite consensus disorder prediction 9 134 - -
Prci14g1374 671 Pfam Protein tyrosine and serine/threonine kinase 301 569 IPR001245 GO:0004672|GO:0006468
Prci14g1374 671 MobiDBLite consensus disorder prediction 252 267 - -
Prci14g1374 671 MobiDBLite consensus disorder prediction 1 145 - -
Prci14g1374 671 MobiDBLite consensus disorder prediction 183 267 - -
Prci14g1374 671 Gene3D Phosphorylase Kinase; domain 1 278 371 - -
Prci14g1374 671 SMART serkin_6 296 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1374 Prci-Chr14 19282696 19286484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1374 105 654 Trihelix Transcription Factor Family AT1G70460 48.917 4.96e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci14g1374 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1374 - - gmx:100781944 822.387