Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1373 ATGCCGTCTTTCAATATCCTTCCTCCATTGTCGTCGCTTCAAAACCCTACTTGGGACCCAATTCACTTCTTCAGACCTATTAGCCCCTTCAATTTCCACCCACGTTCCATAACCCTAACTAACGGTTTTTGCTTGAGAGTCCAGAACTGCAGACCCCATTGCCGGAAGATTAATTGCAATGCTTTGAAGGATTCCGGCGAAGAAACTAAGGTTGTTTTGGACTCCGGGGGCGGCGATGATGGCGGAGGGAGTGATGGTAACGGCGGTGATGGTGGCGGTGATAGGGACGCGCAGAAAAAAGATGAGTCTCCGGGGCCTTTGCCAGATTGGTTAAATTTCACTTCTGATGATGCAAAGACCGTCTTTGCGGCACTGGCAATCTCGCTTGCGTTTCGGTCTTTTGTGGCCGAGCCGAGGTATATTCCTTCGTTGTCAATGTATCCTACATTTGATGTTGGAGATCGAATTGTTGCAGAAAAGGTTTCATACTATTTTAGAAAGCCTTGCACGAACGACATAGTAATATTTAAAAGCCCACCAGTCCTTCAGGAAGTTGGGTACACCGATGATGATGTCTTCATAAAACGAGTGGTTGCAAAGGAAGGTGATATTGTGGAGGTTCGTAAAGGGCATCTTATAGTTAATGGGGTTGAAAGGAATGAAAAGTTCGTCCTTGAACCACCTTCTTATAACATGACACCTACACGTGTGCCGGAGAACTATGTTTTTGTGATGGGAGACAATCGTAATAACAGCTATGATTCGCATGTGTGGGGTCCTCTGCCAGCCAAGAACATCATAGGAAGATCAGTTTTTCGGTATTGGCCACCAAATAGGATTGGCAGCACAGTTTCTGAAGAGAGTTGCCCTGTTGAAAATAACCAGGGGACTAGTCTAGCTTCGCAATAG 909 0.4598 MPSFNILPPLSSLQNPTWDPIHFFRPISPFNFHPRSITLTNGFCLRVQNCRPHCRKINCNALKDSGEETKVVLDSGGGDDGGGSDGNGGDGGGDRDAQKKDESPGPLPDWLNFTSDDAKTVFAALAISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVSYYFRKPCTNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDIVEVRKGHLIVNGVERNEKFVLEPPSYNMTPTRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIGSTVSEESCPVENNQGTSLASQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1373 302 ProSitePatterns Signal peptidases I serine active site. 143 150 IPR019756 GO:0004252|GO:0016020
Prci14g1373 302 MobiDBLite consensus disorder prediction 70 109 - -
Prci14g1373 302 SUPERFAMILY LexA/Signal peptidase 132 283 IPR036286 -
Prci14g1373 302 Pfam Signal peptidase, peptidase S26 118 275 IPR019533 GO:0004252|GO:0006465
Prci14g1373 302 ProSitePatterns Signal peptidases I signature 3. 242 255 IPR019758 GO:0004252|GO:0016020
Prci14g1373 302 NCBIfam signal peptidase I 119 277 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci14g1373 302 Gene3D Umud Fragment, subunit A 131 288 - -
Prci14g1373 302 PRINTS Bacterial leader peptidase 1 (S26A) family signature 237 256 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci14g1373 302 PRINTS Bacterial leader peptidase 1 (S26A) family signature 134 150 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci14g1373 302 PRINTS Bacterial leader peptidase 1 (S26A) family signature 193 205 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci14g1373 302 FunFam Peptidase/ serine-type peptidase 143 274 - -
Prci14g1373 302 PANTHER SIGNAL PEPTIDASE I 107 281 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci14g1373 302 CDD S26_SPase_I 137 269 IPR019533 GO:0004252|GO:0006465
Prci14g1373 302 MobiDBLite consensus disorder prediction 283 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1373 Prci-Chr14 19272403 19275664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1373 146 276 MADS-box Gene Family AT1G29960 31.061 1.10e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1373 K03100 - qsa:O6P43_004025 407.142