Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1355 ATGAAAGATGTTACTCCAAAGAAGCAGAAACAGTGTAATTGTAAACACTCAAAATGTCTAAAGCTATATTGTGAGTGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGTGCAAACTGCTATAACAATGTTGAAAATGAAGCGGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCCAAAATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGTGAAGTTTTAATATTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAGTCTGGTTGCCTGAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATGGCATATATCCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTTTTCATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAAATCTTCTTTGGGCCAACAACCAAGGATACACCTGTTGGCAGGCTTGGTCAATTTCAACAGGCAAACCATATCAAAAGTCCTGCACCCTCCTCATCCTTGTCTCCTGTCCCTGGTTCCCGTGTTGGAACTGCAACATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTGGTATCAGGACAAGCTGCAAAGACTCTTACAGACCAGAAAATGTTGATGGAAAAGAATTCAGAAGATCAGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAGTTACCAAGCCGAAAGGAAGTTGATGTTGAGAAAGCTATGGCTGATGACTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGACAATTCTAGTTCAGATGGGGCTGATGCCCCAAAAAGCAGGCCAATGTCTCCTGGAACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTTATTACAGCTCCATCCCCTAATGGTTCAATGGCTCATGCTTGCAATGCATCTTTGCGTTCTCCATACGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGGATAGTATTGACAAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGAATTAGAGACACAGAGGGAGCCAATCAACAATGGCAGTGGAAACGCCAGTGCTGAAACAGCGCATCCGCAGGTAGCCACCAGTAATGGAGTTGTCAATGCTGTTGTGCCACCCATGGCCTCTAGTATGAACGTGATTGCTTCAGAGGCTCCTGGTAATCTTGTCCCTGAAAATGGGGAAAGTAAGCCTAAGATTGAGAAGTTGTGA 1455 0.4371 MKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGFSSPPVSKKRKGQEIFFGPTTKDTPVGRLGQFQQANHIKSPAPSSSLSPVPGSRVGTATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKMLMEKNSEDQVETSVASSTQEQLPSRKEVDVEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFITAPSPNGSMAHACNASLRSPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSELETQREPINNGSGNASAETAHPQVATSNGVVNAVVPPMASSMNVIASEAPGNLVPENGESKPKIEKL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1355 484 SMART CXC_2 7 47 IPR033467 -
Prci14g1355 484 SMART CXC_2 92 133 IPR033467 -
Prci14g1355 484 ProSiteProfiles CRC domain profile. 8 132 IPR005172 -
Prci14g1355 484 MobiDBLite consensus disorder prediction 465 484 - -
Prci14g1355 484 MobiDBLite consensus disorder prediction 277 293 - -
Prci14g1355 484 MobiDBLite consensus disorder prediction 307 329 - -
Prci14g1355 484 MobiDBLite consensus disorder prediction 413 437 - -
Prci14g1355 484 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 9 44 IPR005172 -
Prci14g1355 484 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 95 129 IPR005172 -
Prci14g1355 484 MobiDBLite consensus disorder prediction 274 339 - -
Prci14g1355 484 PANTHER TESMIN/TSO1-RELATED 2 404 IPR028307 -
Prci14g1355 484 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1355 Prci-Chr14 18870898 18881440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1355 2 419 CPP Transcription Factor Family AT4G29000 65.166 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Prci14g1355 TCR 2.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1355 - - gmx:100777698 785.408