LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g1354	ATGGGGGAAGGTGAGGGTGGGGATTGCCTTCCGAAGAATGTGTCATCGGATGCTACAGTAGCACCGTTGCCGTCGGATGTTCCGGCAAAGAAGCTGGCGAGGCAGCTCGATTTCACGGGTTATAGTGGCGCGGCCTTACCTGAACACCCGCAGTTGCAGCTACAGCCTCAGTCGCAAACGGTGGCGCAGAGTCAGCCGCAGCCACGCCCAGTAACAACACAACCGGTTGTTGTGATGTCTATGCCTCCACAGGCTCTTCATTCTTCAGCAAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCCAACTTTGATATGAAAGATGTTACTCCAAAGAAGCAGAAACAGTGTAATTGTAAACACTCAAAATGTCTAAAGCTATATTGTGAGTGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGTGCAAACTGCTATAACAATGTTGAAAATGAAGCGGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCCAAAATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGTGAAGTTTTAATATTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAGTCTGGTTGCCTGAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATGGCATATATCCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTTTTCATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAAATCTTCTTTGGGCCAACAACCAAGGATACACCTGTTGGCAGGCTTGGTCAATTTCAACAGGCAAACCATATCAAAAGTCCTGCACCCTCCTCATCCTTGTCTCCTGTCCCTGGTTCCCGTGTTGGAACTGCAACATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTGGTATCAGGACAAGCTGCAAAGACTCTTACAGACCAGAAAATGTTGATGGAAAAGAATTCAGAAGATCAGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAGTTACCAAGCCGAAAGGAAGTTGATGTTGAGAAAGCTATGGCTGATGACTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGACAATTCTAGTTCAGATGGGGCTGATGCCCCAAAAAGCAGGCCAATGTCTCCTGGAACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTTATTACAGCTCCATCCCCTAATGGTTCAATGGCTCATGCTTGCAATGCATCTTTGCGTTCTCCATACGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGGATAGTATTGACAAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGAATTAGAGACACAGAGGGAGCCAATCAACAATGGCAGTGGAAACGCCAGTGCTGAAACAGCGCATCCGCAGGTAGCCACCAGTAATGGAGTTGTCAATGCTGTTGTGCCACCCATGGCCTCTAGTATGAACGTGATTGCTTCAGAGGCTCCTGGTAATCTTGTCCCTGAAAATGGGGAAAGTAAGCCTAAGATTGAGAAGTTGTGA	1776	0.4566	MGEGEGGDCLPKNVSSDATVAPLPSDVPAKKLARQLDFTGYSGAALPEHPQLQLQPQSQTVAQSQPQPRPVTTQPVVVMSMPPQALHSSARVGKPESPKSRSRPNFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGFSSPPVSKKRKGQEIFFGPTTKDTPVGRLGQFQQANHIKSPAPSSSLSPVPGSRVGTATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKMLMEKNSEDQVETSVASSTQEQLPSRKEVDVEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFITAPSPNGSMAHACNASLRSPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSELETQREPINNGSGNASAETAHPQVATSNGVVNAVVPPMASSMNVIASEAPGNLVPENGESKPKIEKL	591

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Prci14g1354	591	MobiDBLite	consensus disorder prediction	41	72	-	-
Prci14g1354	591	Coils	Coil	149	169	-	-
Prci14g1354	591	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	202	236	IPR005172	-
Prci14g1354	591	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	116	151	IPR005172	-
Prci14g1354	591	MobiDBLite	consensus disorder prediction	572	591	-	-
Prci14g1354	591	MobiDBLite	consensus disorder prediction	94	111	-	-
Prci14g1354	591	SMART	CXC_2	114	154	IPR033467	-
Prci14g1354	591	SMART	CXC_2	199	240	IPR033467	-
Prci14g1354	591	PANTHER	TESMIN/TSO1-RELATED	49	511	IPR028307	-
Prci14g1354	591	MobiDBLite	consensus disorder prediction	384	400	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g1354	Prci-Chr14	18870297	18881440	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g1354	1	526	CPP Transcription Factor Family	AT4G29000	57.505	0.0	582

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	CPP	Prci14g1354		TCR	3.1e-12	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g1354	-		-	qsa:O6P43_007909	879.011

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