Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1354 ATGGGGGAAGGTGAGGGTGGGGATTGCCTTCCGAAGAATGTGTCATCGGATGCTACAGTAGCACCGTTGCCGTCGGATGTTCCGGCAAAGAAGCTGGCGAGGCAGCTCGATTTCACGGGTTATAGTGGCGCGGCCTTACCTGAACACCCGCAGTTGCAGCTACAGCCTCAGTCGCAAACGGTGGCGCAGAGTCAGCCGCAGCCACGCCCAGTAACAACACAACCGGTTGTTGTGATGTCTATGCCTCCACAGGCTCTTCATTCTTCAGCAAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCCAACTTTGATATGAAAGATGTTACTCCAAAGAAGCAGAAACAGTGTAATTGTAAACACTCAAAATGTCTAAAGCTATATTGTGAGTGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGTGCAAACTGCTATAACAATGTTGAAAATGAAGCGGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCCAAAATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGTGAAGTTTTAATATTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAGTCTGGTTGCCTGAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATGGCATATATCCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTTTTCATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAAATCTTCTTTGGGCCAACAACCAAGGATACACCTGTTGGCAGGCTTGGTCAATTTCAACAGGCAAACCATATCAAAAGTCCTGCACCCTCCTCATCCTTGTCTCCTGTCCCTGGTTCCCGTGTTGGAACTGCAACATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTGGTATCAGGACAAGCTGCAAAGACTCTTACAGACCAGAAAATGTTGATGGAAAAGAATTCAGAAGATCAGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAGTTACCAAGCCGAAAGGAAGTTGATGTTGAGAAAGCTATGGCTGATGACTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGACAATTCTAGTTCAGATGGGGCTGATGCCCCAAAAAGCAGGCCAATGTCTCCTGGAACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTTATTACAGCTCCATCCCCTAATGGTTCAATGGCTCATGCTTGCAATGCATCTTTGCGTTCTCCATACGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGGATAGTATTGACAAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGAATTAGAGACACAGAGGGAGCCAATCAACAATGGCAGTGGAAACGCCAGTGCTGAAACAGCGCATCCGCAGGTAGCCACCAGTAATGGAGTTGTCAATGCTGTTGTGCCACCCATGGCCTCTAGTATGAACGTGATTGCTTCAGAGGCTCCTGGTAATCTTGTCCCTGAAAATGGGGAAAGTAAGCCTAAGATTGAGAAGTTGTGA 1776 0.4566 MGEGEGGDCLPKNVSSDATVAPLPSDVPAKKLARQLDFTGYSGAALPEHPQLQLQPQSQTVAQSQPQPRPVTTQPVVVMSMPPQALHSSARVGKPESPKSRSRPNFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGFSSPPVSKKRKGQEIFFGPTTKDTPVGRLGQFQQANHIKSPAPSSSLSPVPGSRVGTATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKMLMEKNSEDQVETSVASSTQEQLPSRKEVDVEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFITAPSPNGSMAHACNASLRSPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSELETQREPINNGSGNASAETAHPQVATSNGVVNAVVPPMASSMNVIASEAPGNLVPENGESKPKIEKL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1354 591 MobiDBLite consensus disorder prediction 41 72 - -
Prci14g1354 591 Coils Coil 149 169 - -
Prci14g1354 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Prci14g1354 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Prci14g1354 591 MobiDBLite consensus disorder prediction 572 591 - -
Prci14g1354 591 MobiDBLite consensus disorder prediction 94 111 - -
Prci14g1354 591 SMART CXC_2 114 154 IPR033467 -
Prci14g1354 591 SMART CXC_2 199 240 IPR033467 -
Prci14g1354 591 PANTHER TESMIN/TSO1-RELATED 49 511 IPR028307 -
Prci14g1354 591 MobiDBLite consensus disorder prediction 384 400 - -
Prci14g1354 591 MobiDBLite consensus disorder prediction 520 544 - -
Prci14g1354 591 MobiDBLite consensus disorder prediction 1 26 - -
Prci14g1354 591 MobiDBLite consensus disorder prediction 51 72 - -
Prci14g1354 591 MobiDBLite consensus disorder prediction 414 436 - -
Prci14g1354 591 MobiDBLite consensus disorder prediction 381 446 - -
Prci14g1354 591 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Prci14g1354 591 MobiDBLite consensus disorder prediction 86 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1354 Prci-Chr14 18870297 18881440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1354 1 526 CPP Transcription Factor Family AT4G29000 57.505 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Prci14g1354 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1354 - - qsa:O6P43_007909 879.011