Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1342 ATGAATAGAGGCGTTGTTCAGAGCTCGCCGGTGCAACAAATGATGATGGCGGCCGGAAACCCTAATTGGTGGAACATCAACCATACCATGAGGCCTCCTGTTTCTGATAATAATCAACAACCATCTTCTTCTCCTTTCTTCTTCTTCTCATCACCACTACCATCATCATCCAATAACTTCATCTCTCCATATCCACCAGCTTCTTCTCCACCTTTCCCTTCTAATTGGCATGCCAATCAAGATCAGCTTCCTGATTCCTGGAGCAACCTTCTTATGGGTGAAGAAGAAGAAGAAGAAGGTAAGAAAATGGGAAACTGGGAGGAGCAAGTGCTGATGAGTGAGCCTCAAAATGTTGCTCTTGTGGATGTGAAGCAAGAGACCTCACCGGCCAACAGTTATGTGTATGGAGGACATGGCGGCGGCAACAGTAACGAAGAGTTTCCAGTGGCTGCAACGGCCATTAAACCAGGTGGTGGTACTGTTGCTGCTATTTGGTCTCATCATCATCATCATCATCATCAGATAGTGCCTCCAGCTGCTGCTTCTTCTCCACAATCCTGTGTCACAAGTTTCAGCAGCAACATGTTGGATTTCTCTACCACTAAGATAGAGTCTAGGCATCCTCCTCCAGATCGATCTTCTGAGTGTAACAGCAATGGAGGTGGTGGAGCAGTGAAGAAAGCTAGGGTTCAACCATCTACGACGACACAGTCTAGCTTCAAGGTTAGAAAGGAGAAATTAGGTGACAGAATTACAGCCCTTCATCAACTTGTTTCCCCCTTTGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGATATATCAGATTCCTTCAGAGTCATATTGAGGCCCTTAGCTTACCATACTTGGGCACCATTACTACTGGATCATCATCATCAAACATGAGGAACCATCGCTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGGAAGAAGCAAAGAAGGATCTGAAGAGTAGAGGGTTGTGTTTGGTGCCAGTTTCATGCACGCTTCAAGTTGGAAGTGATAATGGAGCTGATTACTGGGCTCCCGCTCTTGGAGGAGGCTTTCGATGA 1098 0.459 MNRGVVQSSPVQQMMMAAGNPNWWNINHTMRPPVSDNNQQPSSSPFFFFSSPLPSSSNNFISPYPPASSPPFPSNWHANQDQLPDSWSNLLMGEEEEEEGKKMGNWEEQVLMSEPQNVALVDVKQETSPANSYVYGGHGGGNSNEEFPVAATAIKPGGGTVAAIWSHHHHHHHQIVPPAAASSPQSCVTSFSSNMLDFSTTKIESRHPPPDRSSECNSNGGGGAVKKARVQPSTTTQSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSHIEALSLPYLGTITTGSSSSNMRNHRSVQGEKNCIFPEDPGQEEAKKDLKSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1342 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 241 290 IPR036638 GO:0046983
Prci14g1342 365 Gene3D - 239 290 IPR036638 GO:0046983
Prci14g1342 365 MobiDBLite consensus disorder prediction 200 241 - -
Prci14g1342 365 CDD bHLH_AtbHLH_like 239 288 IPR045239 -
Prci14g1342 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 231 280 IPR011598 GO:0046983
Prci14g1342 365 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1342 Prci-Chr14 18378161 18382619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1342 1 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.579 1.14e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1342 - - pcin:129293482 684.871