Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1339 ATGAATAGAGGCGTTGTTCAGAGCTCGCCGGTGCAACAAATGATGATGGCGGCCGGAAACCCTAATTGGTGGAACATCAACCATACCATGAGGCCTCCTGTTTCTGATAATAATCAACAACCATCTTCTTCTCCTTTCTTCTTCTTCTCATCACCACTACCATCATCATCCAATAACTTCATCTCTCCATATCCACCAGCTTCTTCTCCACCTTTCCCTTCTAATTGGCATGCCAATCAAGATCAGCTTCCTGATTCCTGGAGCAACCTTCTTATGGGTGAAGAAGAAGAAGAAGAAGGTAAGAAAATGGGAAACTGGGAGGAGCAAGTGCTGATGAGTGAGCCTCAAAATGTTGCTCTTGTGGATGTGAAGCAAGAGACCTCACCGGCCAACAGTTATGTGTATGGAGGACATGGCGGCGGCAACAGTAACGAAGAGTTTCCAGTGGCTGCAACGGCCATTAAACCAGGTGGTGGTACTGTTGCTGCTATTTGGTCTCATCATCATCATCATCATCATCAGATAGTGCCTCCAGCTGCTGCTTCTTCTCCACAATCCTGTGTCACAAGTTTCAGCAGCAACATGTTGGATTTCTCTACCACTAAGATAGAGTCTAGGCATCCTCCTCCAGATCGATCTTCTGAGTGTAACAGCAATGGAGGTGGTGGAGCAGTGAAGAAAGCTAGGGTTCAACCATCTACGACGACACAGTCTAGCTTCAAGGTTAGAAAGGAGAAATTAGGTGACAGAATTACAGCCCTTCATCAACTTGTTTCCCCCTTTGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGATATATCAGATTCCTTCAGAGTCATATTGAGGCCCTTAGCTTACCATACTTGGGCACCATTACTACTGGATCATCATCATCAAACATGAGGAACCATCGCTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGTTGCTGAATGGAAATGGCTTGAAGAGGAAAGCAGATGATGAACAGGAATTACAGGAAGAAGCAAAGAAGGATCTGAAGAGTAGAGGGTTGTGTTTGGTGCCAGTTTCATGCACGCTTCAAGTTGGAAGTGATAATGGAGCTGATTACTGGGCTCCCGCTCTTGGAGGAGGCTTTCGATGA 1152 0.4566 MNRGVVQSSPVQQMMMAAGNPNWWNINHTMRPPVSDNNQQPSSSPFFFFSSPLPSSSNNFISPYPPASSPPFPSNWHANQDQLPDSWSNLLMGEEEEEEGKKMGNWEEQVLMSEPQNVALVDVKQETSPANSYVYGGHGGGNSNEEFPVAATAIKPGGGTVAAIWSHHHHHHHQIVPPAAASSPQSCVTSFSSNMLDFSTTKIESRHPPPDRSSECNSNGGGGAVKKARVQPSTTTQSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSHIEALSLPYLGTITTGSSSSNMRNHRSVQGEKNCIFPEDPGQLLNGNGLKRKADDEQELQEEAKKDLKSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1339 383 Coils Coil 332 352 - -
Prci14g1339 383 CDD bHLH_AtbHLH_like 239 288 IPR045239 -
Prci14g1339 383 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 241 290 IPR036638 GO:0046983
Prci14g1339 383 Gene3D - 239 290 IPR036638 GO:0046983
Prci14g1339 383 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 365 - -
Prci14g1339 383 MobiDBLite consensus disorder prediction 200 240 - -
Prci14g1339 383 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 231 280 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1339 Prci-Chr14 18378161 18382619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1339 1 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.470 7.89e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1339 - - pcin:129293482 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1339 14 18378161 18382619 Prci14g1339 14 18378161 18382619 ECH