Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1338 ATGAATAGAGGCGTTGTTCAGAGCTCGCCGGTGCAACAAATGATGATGGCGGCCGGAAACCCTAATTGGTGGAACATCAACCATACCATGAGGCCTCCTGTTTCTGATAATAATCAACAACCATCTTCTTCTCCTTTCTTCTTCTTCTCATCACCACTACCATCATCATCCAATAACTTCATCTCTCCATATCCACCAGCTTCTTCTCCACCTTTCCCTTCTAATTGGCATGCCAATCAAGATCAGCTTCCTGATTCCTGGAGCAACCTTCTTATGGGTGAAGAAGAAGAAGAAGAAGGTAAGAAAATGGGAAACTGGGAGGAGCAAGTGCTGATGAGTGAGCCTCAAAATGTTGCTCTTGTGGATGTGAAGCAAGAGACCTCACCGGCCAACAGTTATGTGTATGGAGGACATGGCGGCGGCAACAGTAACGAAGAGTTTCCAGTGGCTGCAACGGCCATTAAACCAGGTGGTGGTACTGTTGCTGCTATTTGGTCTCATCATCATCATCATCATCATCAGATAGTGCCTCCAGCTGCTGCTTCTTCTCCACAATCCTGTGTCACAAGTTTCAGCAGCAACATGTTGGATTTCTCTACCACTAAGATAGAGTCTAGGCATCCTCCTCCAGATCGATCTTCTGAGTGTAACAGCAATGGAGGTGGTGGAGCAGTGAAGAAAGCTAGGGTTCAACCATCTACGACGACACAGTCTAGCTTCAAGGTTAGAAAGGAGAAATTAGGTGACAGAATTACAGCCCTTCATCAACTTGTTTCCCCCTTTGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGATATATCAGATTCCTTCAGAGTCATATTGAGGCCCTTAGCTTACCATACTTGGGCACCATTACTACTGGATCATCATCATCAAACATGAGGAACCATCGCTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGTTGCTGAATGGAAATGGCTTGAAGAGGAAAGCAGATGATGAACAGTTGCAGGAATTACAGGAAGAAGCAAAGAAGGATCTGAAGAGTAGAGGGTTGTGTTTGGTGCCAGTTTCATGCACGCTTCAAGTTGGAAGTGATAATGGAGCTGATTACTGGGCTCCCGCTCTTGGAGGAGGCTTTCGATGA 1158 0.4568 MNRGVVQSSPVQQMMMAAGNPNWWNINHTMRPPVSDNNQQPSSSPFFFFSSPLPSSSNNFISPYPPASSPPFPSNWHANQDQLPDSWSNLLMGEEEEEEGKKMGNWEEQVLMSEPQNVALVDVKQETSPANSYVYGGHGGGNSNEEFPVAATAIKPGGGTVAAIWSHHHHHHHQIVPPAAASSPQSCVTSFSSNMLDFSTTKIESRHPPPDRSSECNSNGGGGAVKKARVQPSTTTQSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSHIEALSLPYLGTITTGSSSSNMRNHRSVQGEKNCIFPEDPGQLLNGNGLKRKADDEQLQELQEEAKKDLKSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1338 385 CDD bHLH_AtbHLH_like 239 288 IPR045239 -
Prci14g1338 385 Gene3D - 239 290 IPR036638 GO:0046983
Prci14g1338 385 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 367 - -
Prci14g1338 385 MobiDBLite consensus disorder prediction 200 240 - -
Prci14g1338 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 231 280 IPR011598 GO:0046983
Prci14g1338 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 241 290 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1338 Prci-Chr14 18378161 18382619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1338 1 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.470 8.38e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1338 - - pcin:129293482 723.391