Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1335 ATGTCGGTACCCGAACAAGACTACGTAAGCTTATCAGAGGCTCCGTCTCCATCAATGGAAAGCTCAGACAAGTTTTCTCAGAGAAGAAACGGCTTGAATTTCAAGGCAACTGAACTAAGGCTCGGGTTGCCCGGGTCGGAGTCACCCGAGAGCGACTGGGATTCGGGGGATAAGAATGAGTATCCGTTAGGCATACTCAAGAGTCTTGTGTCTGGGGCAAAGAGGGGCTTCTCAGACGCCATTGATAGCGGTTCTGGGAAGTGGGTTCTCTCTGGAAAAGGTGGTTCTGATATGGTTTTGGGTAAAGATTGTGGCTTGTTCTCTCCCAGAGGTGCTCACACTGGGAAGACCCCTGTCGGGTCTGATTCCGGCAACCATCAAACGGGTTTGGGTCCCTCCGTTGTGAAAGATAGTATTCCTCAGCCCACAAAGCCTTTGCATGAGAAAAAGCCCCAGTTTCCAGCTCCTGCTGCTAAAGCACAGGTTGTGGGATGGCCACCAATCCGATCTTTTCGGAAGAACTCGATGGCTTCTCAGCCTCTAAAGAATGGTGGTGATGCAGAATCAGGCAAGAATGGATGTCTTTATGTAAAAGTGAGCATGGATGGTGCTCCATACTTGAGGAAGGTAGATCTCAACAACTTTGGCTCTTACAAGGAACTTTCTTCTGCTCTGGAAAAGATGTTCAGTGGCTTTACAATGAGTCAATGCAGCTCTCACGGGGTTTCGGGCCGGGACAATATGAGTGAGAGTAGGTTGATGGATCTGCTTAATGGTTCAGAACATGTGCTCACATATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCTTGGGGGATGTTCACTGAATCTTGCAAGAGGATGAGGATAATGAAGAGTTCTGAAGCCATTGGGTTAGCACCAAGAGCGATGGAGAAGTGCAAAAGTCGGAATTAG 945 0.4836 MSVPEQDYVSLSEAPSPSMESSDKFSQRRNGLNFKATELRLGLPGSESPESDWDSGDKNEYPLGILKSLVSGAKRGFSDAIDSGSGKWVLSGKGGSDMVLGKDCGLFSPRGAHTGKTPVGSDSGNHQTGLGPSVVKDSIPQPTKPLHEKKPQFPAPAAKAQVVGWPPIRSFRKNSMASQPLKNGGDAESGKNGCLYVKVSMDGAPYLRKVDLNNFGSYKELSSALEKMFSGFTMSQCSSHGVSGRDNMSESRLMDLLNGSEHVLTYEDKDGDWMLVGDVPWGMFTESCKRMRIMKSSEAIGLAPRAMEKCKSRN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1335 314 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 32 301 IPR003311 GO:0005634|GO:0006355
Prci14g1335 314 MobiDBLite consensus disorder prediction 1 58 - -
Prci14g1335 314 MobiDBLite consensus disorder prediction 1 33 - -
Prci14g1335 314 Pfam AUX/IAA family 37 305 IPR033389 -
Prci14g1335 314 ProSiteProfiles PB1 domain profile. 194 296 IPR000270 GO:0005515
Prci14g1335 314 SUPERFAMILY CAD & PB1 domains 190 295 - -
Prci14g1335 314 Gene3D - 189 307 - -
Prci14g1335 314 FunFam Auxin-responsive protein 189 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1335 Prci-Chr14 18137990 18142470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1335 197 304 B3 DNA Binding Superfamily AT4G23980 31.481 2.14e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci14g1335 AUX_IAA 4.6e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1335 K14484 - qsa:O6P43_007901 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1335 14 18137990 18142470 Prci14g1335 14 18137990 18142470 ECH