Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci14g1304 | ATGGCGTCTTCGATTCATCCCTCTCTGTCCGCCTTCAATCCATCGGGTTACAACCCTACTCGGCGCCTCTCCTTTCATCGTCAGGTTCGCGTTGTTTCACAGTCCAATAGATCTACCCTGAAGGCATCCAAGCCATTGAGACTAGATGGTAACTGTGCGAGGGTAATGGCATCAGGGAGTGTGTCCCAAGGAAGCAGAGCTTCAACAACAGAAGACGTTCTAGAGTGGGTCAAGCAGGACAAGCGAAGAATGCTTCATGTTGTATATTGTGTTGGGGATTTAGACAGGACCATCAAATTTTATACAGAGTGCCTGGGAATGAAGCTACTTAGAAAACGTGATATACCAGAGGAGAGATACACTAATGCCTTTCTTGGATATGGACCTGAAGATGCACACTTTGTTATTGAACTGACATACAATTATGGGGTTGATGCATATGATATTGGAAATGGATTTGGCCATTTCGGCATTGCTGTTGATGATCAGGTTGAAAAGACAGTAGAACTCATTAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTTAAGGGAGGCAGCACAATAATTGCTTTCATTGAAGATCCAGATGGTTATAAATTTGAGCTTTTGCAAAGAGGTCCCTCTCCTGAGCCTTTGTGCCAAGTAATGCTTCGAGTAGGTGATCTTAATCGTTCCATAGAATTTTACGAGAAGGCTTTTGGTATGGAACTTCTTCATACACGAGATAATCCTGAGCAAAAGTATACCATTGCAATGCTTGGTTATGGTCCTGAAGATAAAAGTGCTGTTTTGGAATTGACTTACAACTATGGAGTGACTGGATATGGTAAAGGAAATGGTTATGCTCAGATTGCAGTGGGTACAGATGATGTATACAGGACTGCTGAAGCTATTAAACTTGTTGGAGGACAGATTACTCGGGAACCTGGACCATTACCTGGCATCAACACAAAAATAACAGCATGCTTAGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTTGTCAAGGAGTTGGAATAG | 1041 | 0.4265 | MASSIHPSLSAFNPSGYNPTRRLSFHRQVRVVSQSNRSTLKASKPLRLDGNCARVMASGSVSQGSRASTTEDVLEWVKQDKRRMLHVVYCVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDAHFVIELTYNYGVDAYDIGNGFGHFGIAVDDQVEKTVELIRAKGGKITREPGPVKGGSTIIAFIEDPDGYKFELLQRGPSPEPLCQVMLRVGDLNRSIEFYEKAFGMELLHTRDNPEQKYTIAMLGYGPEDKSAVLELTYNYGVTGYGKGNGYAQIAVGTDDVYRTAEAIKLVGGQITREPGPLPGINTKITACLDPDGWKTVFVDNVDFVKELE | 346 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci14g1304 | 346 | FunFam | Lactoylglutathione lyase | 211 | 346 | - | - | |
| Prci14g1304 | 346 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 215 | 338 | IPR029068 | - | |
| Prci14g1304 | 346 | Gene3D | - | 211 | 346 | IPR029068 | - | |
| Prci14g1304 | 346 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 82 | 213 | IPR029068 | - | |
| Prci14g1304 | 346 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 214 | 338 | IPR037523 | - | |
| Prci14g1304 | 346 | CDD | GlxI_Ni | 84 | 206 | - | - | |
| Prci14g1304 | 346 | NCBIfam | lactoylglutathione lyase | 83 | 209 | IPR004361 | GO:0004462|GO:0046872 | |
| Prci14g1304 | 346 | ProSitePatterns | Glyoxalase I signature 1. | 86 | 107 | IPR018146 | GO:0004462|GO:0046872 | |
| Prci14g1304 | 346 | ProSitePatterns | Glyoxalase I signature 2. | 150 | 162 | IPR018146 | GO:0004462|GO:0046872 | |
| Prci14g1304 | 346 | PANTHER | LACTOYLGLUTATHIONE LYASE | 65 | 346 | - | - | |
| Prci14g1304 | 346 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 84 | 205 | IPR004360 | - | |
| Prci14g1304 | 346 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 217 | 332 | IPR004360 | - | |
| Prci14g1304 | 346 | Gene3D | - | 55 | 209 | IPR029068 | - | |
| Prci14g1304 | 346 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 83 | 208 | IPR037523 | - | |
| Prci14g1304 | 346 | ProSitePatterns | Glyoxalase I signature 1. | 217 | 238 | IPR018146 | GO:0004462|GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci14g1304 | Prci-Chr14 | 17645636 | 17653979 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci14g1304 | 217 | 335 | Calmodulin-binding Proteins | AT1G08110 | 30.345 | 1.09e-12 | 65.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci14g1304 | K01759 | - | gmx:100775714 | 563.918 |