Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1303 ATGAACCATTTGGGTTTTCATCTTCTGTTTCTGAACTGTCTAACATTCTTCTTCAGATTTTTCCCTTGCCAAGCACAGGTTTCAACTAGTGCTCCTTCTCAAGATGTTGTCTCCAATTTCCGACCAAGTCTTGCGGTTGTCATAGGAATCCTCAGCTTCATGTTTGTTCTAACATTCTCTCTCCTCATGTTTGCCAAGTGCTGTAACAGAGGAGCTTCATCAGTTCATGGCAACCCAGAAGGTCAACCTTGGCTTATCAGAACGAGGTCAAGATTCTCAGGAATCGACAAGACTGTCATAGAATCACTTCCCTTCTTCAGATTCTCTTCCTTAAAAGGATCAAAAGAAGGTCTTGAATGTGCTGTTTGCTTATCAAAGTTTGAGGACATTGAGATTCTCAGGCTACTTCCGAAGTGTAAACATGCCTTTCACATTAATTGCATCGATCATTGGCTTGAGAAGCATTCTAGCTGTCCTCTTTGTAGACACAGGGTTGATCCTGAAGATCAGACCATTTTCACATATTCTAACAGCTTGAGGCTGCTCATTAATGGTGGAGCAGAACTGGAGGAAGAATCCAACCTAGGGCTTTTTATTCAGAGAGAGGAACAAGAACAGCCAAATGGATCATCATCAAGATTCAATTTTGGAAGCAGCTTCAGGAGAATCATGAAGGGTTCTACAAAAGAGGAAATTGCAGCTGATGAAGATGGTGGTGGTGATCACAAAAAGGTCTTTCACAAGCACAAACACAAGATTACTGCATCAGATTTCGTTTTGAAGAATCGATGGAGCAACGTGAGCTCCTCAGACCTCATGTTCTTGAACTCGGAGATGCTTGGTTCTACTTCAAGTGTAAGACTTAACAGTATAGCACTTAATGATCATGATCAGAGTCAGGTTTCACCAGAAGAATTAGAAAATGGGCAAGTTATGAACATCAAGGAGGAGATGGGAAGGGAGGTTTCTTTTGACAACAAAGTGATGAGTGGACTGAAGAATAACCTCAATTCTGATTCAGATTCTGCAGGATATCCCAGCCATACATCCAAAAATGTGAATCCAGATGAGAAAAGATCAGTATCAGATATCACAGCTGTCCCTAGATTTGAAGCTTTGGGCATGAAAAATGATAATAAGGGTTCATCTTTGGTTGATGATCAGAACAATGTGAAAGAGGAAAGAGTGAGGCAGATTTGGCTACCAATTGCCAAAAGAACAGTTCGATGGTTTGTGAACAGAGAAAAAAGGTTTCAGCAATCTCTGAATGTATAG 1275 0.4086 MNHLGFHLLFLNCLTFFFRFFPCQAQVSTSAPSQDVVSNFRPSLAVVIGILSFMFVLTFSLLMFAKCCNRGASSVHGNPEGQPWLIRTRSRFSGIDKTVIESLPFFRFSSLKGSKEGLECAVCLSKFEDIEILRLLPKCKHAFHINCIDHWLEKHSSCPLCRHRVDPEDQTIFTYSNSLRLLINGGAELEEESNLGLFIQREEQEQPNGSSSRFNFGSSFRRIMKGSTKEEIAADEDGGGDHKKVFHKHKHKITASDFVLKNRWSNVSSSDLMFLNSEMLGSTSSVRLNSIALNDHDQSQVSPEELENGQVMNIKEEMGREVSFDNKVMSGLKNNLNSDSDSAGYPSHTSKNVNPDEKRSVSDITAVPRFEALGMKNDNKGSSLVDDQNNVKEERVRQIWLPIAKRTVRWFVNREKRFQQSLNV 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1303 424 MobiDBLite consensus disorder prediction 331 361 - -
Prci14g1303 424 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 171 IPR013083 -
Prci14g1303 424 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Prci14g1303 424 MobiDBLite consensus disorder prediction 331 351 - -
Prci14g1303 424 FunFam RING-H2 finger protein ATL43 95 169 - -
Prci14g1303 424 SUPERFAMILY RING/U-box 99 168 - -
Prci14g1303 424 SMART ring_2 120 161 IPR001841 -
Prci14g1303 424 CDD RING-H2_EL5-like 119 162 - -
Prci14g1303 424 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 27 416 - -
Prci14g1303 424 Pfam Ring finger domain 119 162 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1303 Prci-Chr14 17585189 17589520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1303 16 419 C3H Transcription Factor Family AT4G28890 47.100 5.76e-111 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1303 K10664 - gmx:100803207 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1303 14 17585189 17589520 Prci14g1303 14 17585189 17589520 ECH