Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1297 ATGGGTGGCCCTCCTCTAGATGAGGAATTTGAATCTCTTCCTCCAGGTCTATCCCTCCACCGTGTTGGTCTCAACAATTCCATTTCTGCTTGTCAAGGGGATCAAGGACCAATTAAAAGGAGAAAGGTTTCTGAGAGTGCAATTGGAAGTCACCCTGAATCAAATAAGAAAGCACCATTGAAAAAACACGGTATTGGAAAGGGTTTAATGACAGTATGGAGGGCTACAAATCCAGACGCTGCAGAAGTTCCTATTGGCTTTGTTGTTGGCAATAAGCCATGCAAAACCCTAAACAATGCTGGAAGGAAAAAGAATAAACTACAGAATGTAAGAAATAAAATACAAGAAAAGAGGAAGGCTTTCATTCAAAGAAGAGTGGTGAAATATAAGCAGGATGCAAGTCAGAATCAACCATGGAAGGAAAAATGTGAACTTGTTTTGGGTAGATTTATATCTGAGGAGGAACTTGATCGATTGTCATTGTTAATTGATGATGAAGAGCTAGAGATGAGAGAGTTACAAGCAAGGGCAGATATGCATATGTGTTCTGATCATCTTGCTGTCAGTGGAATTCTTGGCTGCTCTCTTTGTAAAGATGTGCTGTCTAAGTTTCCACCAGATACTGTTAAGATGAAGAAGCCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAACTGTCAAGAAACTTTTTAAGGTATTCCATTTTCTTTATACATATGCTACTGTTGTTAATATTTGCCCCTTCACTCTTGATGAGTTGGCTCAAGCCTTTCATGATAAGGACTCAATGCTTCTTGGAAAGATTCATGTGGCCCTTCTTACACTTCTTCTATCTGACATTGAAGTGGAACTTACTGGCGGATTTCCGCCTCATCTAAATAAGTCATGCAATTTTCTTGCATTGCTTCACTCGGTTGAAAATCAAGAATATTCTCTGGACTTCTGGAAAAGATCACTTAATCCACTTACGTGGATAGAAATACTCCGACAAGTTTTGGTTGCCGCTGGCTTTGGTTCAAAACAAGTTTCTTTGCGAAGAGAAGCACTTAACAAGGAACTGAATCTCCTAGTAAAGTATGGCTTATGCGCTGGCACTTTGAAGGGCGAGTTGTTTAAAATTTTGTTAGCACAAGGAAATAATGGGTCAAAAGTATCTGAACTAGCAAAGTCAATGCAGATTGTTGAATTGAACCTTGTCAGCACAACAGAGGAGCTTGAATCTTTAATATATTCAACCCTGTCGAGTGATATTACTTTATTTGAAAAGATCTCATCATCTGCATATCGACTGCGCATGAGCTTGTTTAAGGACATTGATGACATTCAGTCAGACACAGAAGACTCTGGAAGTGTAGATAATGAACTTAATGACGGTAATACATGGAGCAGCAGTGATGATTTTGAATGTGATTCAGGGAACTCCAACTTAAGGAAATTGAAGTGGGTAAGCAATTCTACGATGAAAAAAAATATGCTCAAAGCATCAACTGAAATTGACGAGAGCCATCCAGGAGAAGTGTGGCTATTTGGACTGATGGAGGGTGAATATTCGGATTTGAGCATTGAAGAAAAGTTGAATGCAATAGTGGCTCTGACTGATCTTCTTTCTTCTGGATCTAGCATTAGGATGAAGGATCCAGCAGAAGTTACTGTTGATTACAGTTCGAGCATCCAGTTACGTGGTTCTGGAGCAAAAATAAAGAGGTCGCTAGTAAGGAAGCCTGGGTCATGTTGGAATCAGATTGGACCAATGCATTATGTTAGAGAAGGGCATTCATCATTGAATCCTCAGTCCTATGCAGTGGATTCCTCATTATTATTCTCAAATATCTACACTGAGGAGGAATCCTTTGAGAATGGGAACAAAGCAACTGAAATAGGTTTAACCAATTCACACCCCATTCAATCAGTGTTTTTGGGATCTGACCGTAGGTACAATAGATACTGGCTTTTCTTGGGGCCTTGCAATGTGTGTGACCCAGGCCATAGGAGAGTCTACTTTGAATCTTCTGAAGATGGTCACTGGGAAGTGATCGATAATGATGAGGCTTTATGTGCTTTGTTGTCATTTTTGGATGATAGAGGCAAACGGGAGGCACTTCTTGTTGCATCCTTGGAGAAGCTGAAAGCCCCTCTTTGCAGAGCTATGTCCAGGACGATGGTCAACCATACTAGAATATGTCATATGTCAAATTCTGATCAATCTGATCTTGATAGGATCACAGGGGATAGTTACTCTCCAGTATCTGATGTAGATAACCTGAGCCTGATTGAGACGGTCTGTGACTCTTTACCTTCAGCTGGGGCTGTGGTAATTGAAGCTGCTAAGAAGGGAGCAGAAAAAATGCAAAAGTGGCTCCGTCTCCAAGCATACGATTCATGGATTTGGAATTCCTTTTATTTAAATCTCAATGTTGTGAAATATGGTAGAAGGTCTTATATTGATTCTCTGGCCAGATGTGAGAGTTGTCATGATTTATTCTGGAGAGATGAGAGACACTGTAAAATTTGCCATTTGACATTTGAGCTTGACTTTGATCTTGAAGAAAGATATGCAATCCACACAGCCACATGCAGGCAGAAAGAAGACAGTAACACTTCTCCAAATTACAAAATCTTATCATCCCAGATCCAATCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGTAGATGCGCTGGTGGGTGCGTGGAGGAAGTCTGCTCATAAGCTGTGGGTTAGACGACTCAGACGCACTTCAACTTTAACTGAGCTTTTTCAGGTTGTTGCTGATTTCGTTGGTGCTATCAATGAGGATTGGTTGTTTCAATCTAGTTTTCCTGATGGTGTGGTTGATAAACTCATTGCATCTTTTGCGTCTATGCACCATACTTCATCAGCTCTTGCTCTATGGTTAGTGAAATTGGATGCCATAATTGCCCCTTACCTGGACAAAGTCCAGCCTCCAAAGAAGCAGGACATTACTAAGAGAAACTTCTCTGGTGGAGTTTAA 3003 0.4063 MGGPPLDEEFESLPPGLSLHRVGLNNSISACQGDQGPIKRRKVSESAIGSHPESNKKAPLKKHGIGKGLMTVWRATNPDAAEVPIGFVVGNKPCKTLNNAGRKKNKLQNVRNKIQEKRKAFIQRRVVKYKQDASQNQPWKEKCELVLGRFISEEELDRLSLLIDDEELEMRELQARADMHMCSDHLAVSGILGCSLCKDVLSKFPPDTVKMKKPICLQPWDSSPETVKKLFKVFHFLYTYATVVNICPFTLDELAQAFHDKDSMLLGKIHVALLTLLLSDIEVELTGGFPPHLNKSCNFLALLHSVENQEYSLDFWKRSLNPLTWIEILRQVLVAAGFGSKQVSLRREALNKELNLLVKYGLCAGTLKGELFKILLAQGNNGSKVSELAKSMQIVELNLVSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSLFKDIDDIQSDTEDSGSVDNELNDGNTWSSSDDFECDSGNSNLRKLKWVSNSTMKKNMLKASTEIDESHPGEVWLFGLMEGEYSDLSIEEKLNAIVALTDLLSSGSSIRMKDPAEVTVDYSSSIQLRGSGAKIKRSLVRKPGSCWNQIGPMHYVREGHSSLNPQSYAVDSSLLFSNIYTEEESFENGNKATEIGLTNSHPIQSVFLGSDRRYNRYWLFLGPCNVCDPGHRRVYFESSEDGHWEVIDNDEALCALLSFLDDRGKREALLVASLEKLKAPLCRAMSRTMVNHTRICHMSNSDQSDLDRITGDSYSPVSDVDNLSLIETVCDSLPSAGAVVIEAAKKGAEKMQKWLRLQAYDSWIWNSFYLNLNVVKYGRRSYIDSLARCESCHDLFWRDERHCKICHLTFELDFDLEERYAIHTATCRQKEDSNTSPNYKILSSQIQSLKAAIYAIESVMPVDALVGAWRKSAHKLWVRRLRRTSTLTELFQVVADFVGAINEDWLFQSSFPDGVVDKLIASFASMHHTSSALALWLVKLDAIIAPYLDKVQPPKKQDITKRNFSGGV 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1297 1000 SMART testlast3 224 283 IPR018501 -
Prci14g1297 1000 MobiDBLite consensus disorder prediction 453 469 - -
Prci14g1297 1000 MobiDBLite consensus disorder prediction 28 62 - -
Prci14g1297 1000 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 511 543 IPR028942 -
Prci14g1297 1000 ProSiteProfiles DDT domain profile. 224 283 IPR018501 -
Prci14g1297 1000 PANTHER HOMEOBOX PROTEIN SIX 115 979 - -
Prci14g1297 1000 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 636 709 IPR028941 -
Prci14g1297 1000 Coils Coil 156 176 - -
Prci14g1297 1000 Pfam DDT domain 225 280 IPR018501 -
Prci14g1297 1000 Coils Coil 97 124 - -
Prci14g1297 1000 MobiDBLite consensus disorder prediction 444 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1297 Prci-Chr14 17520025 17530749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1297 112 976 Homeobox Transcription Factor Family AT1G28420 27.220 2.96e-73 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Prci14g1297 WSD 2.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1297 - - gmx:100792062 1379.77