Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1296 ATGAAAGTTCAAAGGAAAACGGCTTCTCAGCTTCAGGCCCTTAATAATTTTTATAAAGAGGAGAAGTATCCAACACCGAGAGCAATTGTAGACTTTGCGGGTGCTTTGGGGTTGACATATAAGCAAGTTCAATATTGGTTTGTTGAGCAAAGGAGGAGAGAGAAAGAGAATGGAGTGTTAGTGCCGTCATGTTCTTCTTCGCGATACAATGCAGTTATAAGTAGGAGCGTTAGGAGGCAGAAAAAGCAGAAAAGTCATCAGGAGTTGTTTACGGCAAACTGCATTCTGAAGGTGTTCCAGATGGGTGGCCCTCCTCTAGATGAGGAATTTGAATCTCTTCCTCCAGGTCTCAACAATTCCATTTCTGCTTGTCAAGGGGATCAAGGACCAATTAAAAGGAGAAAGGTTTCTGAGAGTGCAATTGGAAGTCACCCTGAATCAAATAAGAAAGCACCATTGAAAAAACACGGTATTGGAAAGGGTTTAATGACAGTATGGAGGGCTACAAATCCAGACGCTGCAGAAGTTCCTATTGGCTTTGTTGTTGGCAATAAGCCATGCAAAACCCTAAACAATGCTGGAAGGAAAAAGAATAAACTACAGAATGTAAGAAATAAAATACAAGAAAAGAGGAAGGCTTTCATTCAAAGAAGAGTGGTGAAATATAAGCAGGATGCAAGTCAGAATCAACCATGGAAGGAAAAATGTGAACTTGTTTTGGGTAGATTTATATCTGAGGAGGAACTTGATCGATTGTCATTGTTAATTGATGATGAAGAGCTAGAGATGAGAGAGTTACAAGCAAGGGCAGATATGCATATGTGTTCTGATCATCTTGCTGTCAGTGGAATTCTTGGCTGCTCTCTTTGTAAAGATGTGCTGTCTAAGTTTCCACCAGATACTGTTAAGATGAAGAAGCCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAACTGTCAAGAAACTTTTTAAGGTATTCCATTTTCTTTATACATATGCTACTGTTGTTAATATTTGCCCCTTCACTCTTGATGAGTTGGCTCAAGCCTTTCATGATAAGGACTCAATGCTTCTTGGAAAGATTCATGTGGCCCTTCTTACACTTCTTCTATCTGACATTGAAGTGGAACTTACTGGCGGATTTCCGCCTCATCTAAATAAGTCATGCAATTTTCTTGCATTGCTTCACTCGGTTGAAAATCAAGAATATTCTCTGGACTTCTGGAAAAGATCACTTAATCCACTTACGTGGATAGAAATACTCCGACAAGTTTTGGTTGCCGCTGGCTTTGGTTCAAAACAAGTTTCTTTGCGAAGAGAAGCACTTAACAAGGAACTGAATCTCCTAGTAAAGTATGGCTTATGCGCTGGCACTTTGAAGGGCGAGTTGTTTAAAATTTTGTTAGCACAAGGAAATAATGGGTCAAAAGTATCTGAACTAGCAAAGTCAATGCAGATTGTTGAATTGAACCTTGTCAGCACAACAGAGGAGCTTGAATCTTTAATATATTCAACCCTGTCGAGTGATATTACTTTATTTGAAAAGATCTCATCATCTGCATATCGACTGCGCATGAGCTTGTTTAAGGACATTGATGACATTCAGTCAGACACAGAAGACTCTGGAAGTGTAGATAATGAACTTAATGACGGTAATACATGGAGCAGCAGTGATGATTTTGAATGTGATTCAGGGAACTCCAACTTAAGGAAATTGAAGTGGGTAAGCAATTCTACGATGAAAAAAAATATGCTCAAAGCATCAACTGAAATTGACGAGAGCCATCCAGGAGAAGTGTGGCTATTTGGACTGATGGAGGGTGAATATTCGGATTTGAGCATTGAAGAAAAGTTGAATGCAATAGTGGCTCTGACTGATCTTCTTTCTTCTGGATCTAGCATTAGGATGAAGGATCCAGCAGAAGTTACTGTTGATTACAGTTCGAGCATCCAGTTACGTGGTTCTGGAGCAAAAATAAAGAGGTCGCTAGTAAGGAAGCCTGGGTCATGTTGGAATCAGATTGGACCAATGCATTATGTTAGAGAAGGGCATTCATCATTGAATCCTCAGTCCTATGCAGTGGATTCCTCATTATTATTCTCAAATATCTACACTGAGGAGGAATCCTTTGAGAATGGGAACAAAGCAACTGAAATAGGTTTAACCAATTCACACCCCATTCAATCAGTGTTTTTGGGATCTGACCGTAGGTACAATAGATACTGGCTTTTCTTGGGGCCTTGCAATGTGTGTGACCCAGGCCATAGGAGAGTCTACTTTGAATCTTCTGAAGATGGTCACTGGGAAGTGATCGATAATGATGAGGCTTTATGTGCTTTGTTGTCATTTTTGGATGATAGAGGCAAACGGGAGGCACTTCTTGTTGCATCCTTGGAGAAGCTGAAAGCCCCTCTTTGCAGAGCTATGTCCAGGACGATGGTCAACCATACTAGAATATGTCATATGTCAAATTCTGATCAATCTGATCTTGATAGGATCACAGGGGATAGTTACTCTCCAGTATCTGATGTAGATAACCTGAGCCTGATTGAGACGGTCTGTGACTCTTTACCTTCAGCTGGGGCTGTGGTAATTGAAGCTGCTAAGAAGGGAGCAGAAAAAATGCAAAAGTGGCTCCGTCTCCAAGCATACGATTCATGGATTTGGAATTCCTTTTATTTAAATCTCAATGTTGTGAAATATGGTAGAAGGTCTTATATTGATTCTCTGGCCAGATGTGAGAGTTGTCATGATTTATTCTGGAGAGATGAGAGACACTGTAAAATTTGCCATTTGACATTTGAGCTTGACTTTGATCTTGAAGAAAGATATGCAATCCACACAGCCACATGCAGGCAGAAAGAAGACAGTAACACTTCTCCAAATTACAAAATCTTATCATCCCAGATCCAATCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGTAGATGCGCTGGTGGGTGCGTGGAGGAAGTCTGCTCATAAGCTGTGGGTTAGACGACTCAGACGCACTTCAACTTTAACTGAGCTTTTTCAGGTTGTTGCTGATTTCGTTGGTGCTATCAATGAGGATTGGTTGTTTCAATCTAGTTTTCCTGATGGTGTGGTTGATAAACTCATTGCATCTTTTGCGTCTATGCACCATACTTCATCAGCTCTTGCTCTATGGTTAGTGAAATTGGATGCCATAATTGCCCCTTACCTGGACAAAGTCCAGCCTCCAAAGAAGCAGGACATTACTAAGAGAAACTTCTCTGGTGGAGTTTAA 3282 0.4065 MKVQRKTASQLQALNNFYKEEKYPTPRAIVDFAGALGLTYKQVQYWFVEQRRREKENGVLVPSCSSSRYNAVISRSVRRQKKQKSHQELFTANCILKVFQMGGPPLDEEFESLPPGLNNSISACQGDQGPIKRRKVSESAIGSHPESNKKAPLKKHGIGKGLMTVWRATNPDAAEVPIGFVVGNKPCKTLNNAGRKKNKLQNVRNKIQEKRKAFIQRRVVKYKQDASQNQPWKEKCELVLGRFISEEELDRLSLLIDDEELEMRELQARADMHMCSDHLAVSGILGCSLCKDVLSKFPPDTVKMKKPICLQPWDSSPETVKKLFKVFHFLYTYATVVNICPFTLDELAQAFHDKDSMLLGKIHVALLTLLLSDIEVELTGGFPPHLNKSCNFLALLHSVENQEYSLDFWKRSLNPLTWIEILRQVLVAAGFGSKQVSLRREALNKELNLLVKYGLCAGTLKGELFKILLAQGNNGSKVSELAKSMQIVELNLVSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSLFKDIDDIQSDTEDSGSVDNELNDGNTWSSSDDFECDSGNSNLRKLKWVSNSTMKKNMLKASTEIDESHPGEVWLFGLMEGEYSDLSIEEKLNAIVALTDLLSSGSSIRMKDPAEVTVDYSSSIQLRGSGAKIKRSLVRKPGSCWNQIGPMHYVREGHSSLNPQSYAVDSSLLFSNIYTEEESFENGNKATEIGLTNSHPIQSVFLGSDRRYNRYWLFLGPCNVCDPGHRRVYFESSEDGHWEVIDNDEALCALLSFLDDRGKREALLVASLEKLKAPLCRAMSRTMVNHTRICHMSNSDQSDLDRITGDSYSPVSDVDNLSLIETVCDSLPSAGAVVIEAAKKGAEKMQKWLRLQAYDSWIWNSFYLNLNVVKYGRRSYIDSLARCESCHDLFWRDERHCKICHLTFELDFDLEERYAIHTATCRQKEDSNTSPNYKILSSQIQSLKAAIYAIESVMPVDALVGAWRKSAHKLWVRRLRRTSTLTELFQVVADFVGAINEDWLFQSSFPDGVVDKLIASFASMHHTSSALALWLVKLDAIIAPYLDKVQPPKKQDITKRNFSGGV 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1296 1093 SMART HOX_1 1 61 IPR001356 GO:0003677
Prci14g1296 1093 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 604 636 IPR028942 -
Prci14g1296 1093 Pfam DDT domain 318 373 IPR018501 -
Prci14g1296 1093 Coils Coil 190 217 - -
Prci14g1296 1093 MobiDBLite consensus disorder prediction 537 562 - -
Prci14g1296 1093 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 729 802 IPR028941 -
Prci14g1296 1093 Gene3D - 1 60 - -
Prci14g1296 1093 SUPERFAMILY Homeodomain-like 4 58 IPR009057 -
Prci14g1296 1093 ProSiteProfiles 'Homeobox' domain profile. 1 57 IPR001356 GO:0003677
Prci14g1296 1093 ProSiteProfiles DDT domain profile. 317 376 IPR018501 -
Prci14g1296 1093 SMART testlast3 317 376 IPR018501 -
Prci14g1296 1093 MobiDBLite consensus disorder prediction 546 562 - -
Prci14g1296 1093 PANTHER HOMEOBOX PROTEIN SIX 208 1072 - -
Prci14g1296 1093 Coils Coil 249 269 - -
Prci14g1296 1093 CDD homeodomain 2 55 IPR001356 GO:0003677
Prci14g1296 1093 Pfam Homeodomain 5 55 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1296 Prci-Chr14 17520025 17530749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1296 205 1069 Homeobox Transcription Factor Family AT1G28420 26.942 3.09e-73 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci14g1296 WSD 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1296 - - gmx:100792062 1410.2