Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1295 ATGAAAGTTCAAAGGAAAACGGCTTCTCAGCTTCAGGCCCTTAATAATTTTTATAAAGAGGAGAAGTATCCAACACCGAGAGCAATTGTAGACTTTGCGGGTGCTTTGGGGTTGACATATAAGCAAGTTCAATATTGGTTTGTTGAGCAAAGGAGGAGAGAGAAAGAGAATGGAGTGTTAGTGCCGTCATGTTCTTCTTCGCGATACAATGCAGTTATAAGTAGGAGCGTTAGGAGGCAGAAAAAGCAGAAAAGTCATCAGGAGTTGTTTACGGCAAACTGCATTCTGAAGGTGTTCCAGATGGGTGGCCCTCCTCTAGATGAGGAATTTGAATCTCTTCCTCCAGGTCTATCCCTCCACCGTGTTGGTCTCAACAATTCCATTTCTGCTTGTCAAGGGGATCAAGGACCAATTAAAAGGAGAAAGGTTTCTGAGAGTGCAATTGGAAGTCACCCTGAATCAAATAAGAAAGCACCATTGAAAAAACACGGTATTGGAAAGGGTTTAATGACAGTATGGAGGGCTACAAATCCAGACGCTGCAGAAGTTCCTATTGGCTTTGTTGTTGGCAATAAGCCATGCAAAACCCTAAACAATGCTGGAAGGAAAAAGAATAAACTACAGAATGTAAGAAATAAAATACAAGAAAAGAGGAAGGCTTTCATTCAAAGAAGAGTGGTGAAATATAAGCAGGATGCAAGTCAGAATCAACCATGGAAGGAAAAATGTGAACTTGTTTTGGGTAGATTTATATCTGAGGAGGAACTTGATCGATTGTCATTGTTAATTGATGATGAAGAGCTAGAGATGAGAGAGTTACAAGCAAGGGCAGATATGCATATGTGTTCTGATCATCTTGCTGTCAGTGGAATTCTTGGCTGCTCTCTTTGTAAAGATGTGCTGTCTAAGTTTCCACCAGATACTGTTAAGATGAAGAAGCCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAACTGTCAAGAAACTTTTTAAGGTATTCCATTTTCTTTATACATATGCTACTGTTGTTAATATTTGCCCCTTCACTCTTGATGAGTTGGCTCAAGCCTTTCATGATAAGGACTCAATGCTTCTTGGAAAGATTCATGTGGCCCTTCTTACACTTCTTCTATCTGACATTGAAGTGGAACTTACTGGCGGATTTCCGCCTCATCTAAATAAGTCATGCAATTTTCTTGCATTGCTTCACTCGGTTGAAAATCAAGAATATTCTCTGGACTTCTGGAAAAGATCACTTAATCCACTTACGTGGATAGAAATACTCCGACAAGTTTTGGTTGCCGCTGGCTTTGGTTCAAAACAAGTTTCTTTGCGAAGAGAAGCACTTAACAAGGAACTGAATCTCCTAGTAAAGTATGGCTTATGCGCTGGCACTTTGAAGGGCGAGTTGTTTAAAATTTTGTTAGCACAAGGAAATAATGGGTCAAAAGTATCTGAACTAGCAAAGTCAATGCAGATTGTTGAATTGAACCTTGTCAGCACAACAGAGGAGCTTGAATCTTTAATATATTCAACCCTGTCGAGTGATATTACTTTATTTGAAAAGATCTCATCATCTGCATATCGACTGCGCATGAGCTTGTTTAAGGACATTGATGACATTCAGTCAGACACAGAAGACTCTGGAAGTGTAGATAATGAACTTAATGACGGTAATACATGGAGCAGCAGTGATGATTTTGAATGTGATTCAGGGAACTCCAACTTAAGGAAATTGAAGTGGGTAAGCAATTCTACGATGAAAAAAAATATGCTCAAAGCATCAACTGAAATTGACGAGAGCCATCCAGGAGAAGTGTGGCTATTTGGACTGATGGAGGGTGAATATTCGGATTTGAGCATTGAAGAAAAGTTGAATGCAATAGTGGCTCTGACTGATCTTCTTTCTTCTGGATCTAGCATTAGGATGAAGGATCCAGCAGAAGTTACTGTTGATTACAGTTCGAGCATCCAGTTACGTGGTTCTGGAGCAAAAATAAAGAGGTCGCTAGTAAGGAAGCCTGGGTCATGTTGGAATCAGATTGGACCAATGCATTATGTTAGAGAAGGGCATTCATCATTGAATCCTCAGTCCTATGCAGTGGATTCCTCATTATTATTCTCAAATATCTACACTGAGGAGGAATCCTTTGAGAATGGGAACAAAGCAACTGAAATAGGTTTAACCAATTCACACCCCATTCAATCAGTGTTTTTGGGATCTGACCGTAGGTACAATAGATACTGGCTTTTCTTGGGGCCTTGCAATGTGTGTGACCCAGGCCATAGGAGAGTCTACTTTGAATCTTCTGAAGATGGTCACTGGGAAGTGATCGATAATGATGAGGCTTTATGTGCTTTGTTGTCATTTTTGGATGATAGAGGCAAACGGGAGGCACTTCTTGTTGCATCCTTGGAGAAGCTGAAAGCCCCTCTTTGCAGAGCTATGTCCAGGACGATGGTCAACCATACTAGAATATGTCATATGTCAAATTCTGATCAATCTGATCTTGATAGGATCACAGGGGATAGTTACTCTCCAGTATCTGATGTAGATAACCTGAGCCTGATTGAGACGGTCTGTGACTCTTTACCTTCAGCTGGGGCTGTGGTAATTGAAGCTGCTAAGAAGGGAGCAGAAAAAATGCAAAAGTGGCTCCGTCTCCAAGCATACGATTCATGGATTTGGAATTCCTTTTATTTAAATCTCAATGTTGTGAAATATGGTAGAAGGTCTTATATTGATTCTCTGGCCAGATGTGAGAGTTGTCATGATTTATTCTGGAGAGATGAGAGACACTGTAAAATTTGCCATTTGACATTTGAGCTTGACTTTGATCTTGAAGAAAGATATGCAATCCACACAGCCACATGCAGGCAGAAAGAAGACAGTAACACTTCTCCAAATTACAAAATCTTATCATCCCAGATCCAATCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGTAGATGCGCTGGTGGGTGCGTGGAGGAAGTCTGCTCATAAGCTGTGGGTTAGACGACTCAGACGCACTTCAACTTTAACTGAGCTTTTTCAGGTTGTTGCTGATTTCGTTGGTGCTATCAATGAGGATTGGTTGTTTCAATCTAGTTTTCCTGATGGTGTGGTTGATAAACTCATTGCATCTTTTGCGTCTATGCACCATACTTCATCAGCTCTTGCTCTATGGTTAGTGAAATTGGATGCCATAATTGCCCCTTACCTGGACAAAGTCCAGCCTCCAAAGAAGCAGGACATTACTAAGAGAAACTTCTCTGGTGGAGTTTAA 3303 0.4075 MKVQRKTASQLQALNNFYKEEKYPTPRAIVDFAGALGLTYKQVQYWFVEQRRREKENGVLVPSCSSSRYNAVISRSVRRQKKQKSHQELFTANCILKVFQMGGPPLDEEFESLPPGLSLHRVGLNNSISACQGDQGPIKRRKVSESAIGSHPESNKKAPLKKHGIGKGLMTVWRATNPDAAEVPIGFVVGNKPCKTLNNAGRKKNKLQNVRNKIQEKRKAFIQRRVVKYKQDASQNQPWKEKCELVLGRFISEEELDRLSLLIDDEELEMRELQARADMHMCSDHLAVSGILGCSLCKDVLSKFPPDTVKMKKPICLQPWDSSPETVKKLFKVFHFLYTYATVVNICPFTLDELAQAFHDKDSMLLGKIHVALLTLLLSDIEVELTGGFPPHLNKSCNFLALLHSVENQEYSLDFWKRSLNPLTWIEILRQVLVAAGFGSKQVSLRREALNKELNLLVKYGLCAGTLKGELFKILLAQGNNGSKVSELAKSMQIVELNLVSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSLFKDIDDIQSDTEDSGSVDNELNDGNTWSSSDDFECDSGNSNLRKLKWVSNSTMKKNMLKASTEIDESHPGEVWLFGLMEGEYSDLSIEEKLNAIVALTDLLSSGSSIRMKDPAEVTVDYSSSIQLRGSGAKIKRSLVRKPGSCWNQIGPMHYVREGHSSLNPQSYAVDSSLLFSNIYTEEESFENGNKATEIGLTNSHPIQSVFLGSDRRYNRYWLFLGPCNVCDPGHRRVYFESSEDGHWEVIDNDEALCALLSFLDDRGKREALLVASLEKLKAPLCRAMSRTMVNHTRICHMSNSDQSDLDRITGDSYSPVSDVDNLSLIETVCDSLPSAGAVVIEAAKKGAEKMQKWLRLQAYDSWIWNSFYLNLNVVKYGRRSYIDSLARCESCHDLFWRDERHCKICHLTFELDFDLEERYAIHTATCRQKEDSNTSPNYKILSSQIQSLKAAIYAIESVMPVDALVGAWRKSAHKLWVRRLRRTSTLTELFQVVADFVGAINEDWLFQSSFPDGVVDKLIASFASMHHTSSALALWLVKLDAIIAPYLDKVQPPKKQDITKRNFSGGV 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1295 1100 Coils Coil 197 224 - -
Prci14g1295 1100 SMART HOX_1 1 61 IPR001356 GO:0003677
Prci14g1295 1100 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 736 809 IPR028941 -
Prci14g1295 1100 Gene3D - 1 60 - -
Prci14g1295 1100 SUPERFAMILY Homeodomain-like 4 58 IPR009057 -
Prci14g1295 1100 Coils Coil 256 276 - -
Prci14g1295 1100 MobiDBLite consensus disorder prediction 544 569 - -
Prci14g1295 1100 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 611 643 IPR028942 -
Prci14g1295 1100 ProSiteProfiles DDT domain profile. 324 383 IPR018501 -
Prci14g1295 1100 ProSiteProfiles 'Homeobox' domain profile. 1 57 IPR001356 GO:0003677
Prci14g1295 1100 PANTHER HOMEOBOX PROTEIN SIX 215 1079 - -
Prci14g1295 1100 Pfam Homeodomain 5 55 IPR001356 GO:0003677
Prci14g1295 1100 CDD homeodomain 2 55 IPR001356 GO:0003677
Prci14g1295 1100 SMART testlast3 324 383 IPR018501 -
Prci14g1295 1100 Pfam DDT domain 325 380 IPR018501 -
Prci14g1295 1100 MobiDBLite consensus disorder prediction 553 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1295 Prci-Chr14 17520025 17530749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1295 212 1076 Homeobox Transcription Factor Family AT1G28420 27.133 5.43e-73 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci14g1295 WSD 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1295 - - gmx:100792062 1404.04