Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1294 ATGAAAGTTCAAAGGAAAACGGCTTCTCAGCTTCAGGCCCTTAATAATTTTTATAAAGAGGAGAAGTATCCAACACCGAGAGCAATTGTAGACTTTGCGGGTGCTTTGGGGTTGACATATAAGCAAGTTCAATATTGGTTTGTTGAGCAAAGGAGGAGAGAGAAAGAGAATGGAGTGTTAGTGCCGTCATGTTCTTCTTCGCTTATAAGTAGGAGCGTTAGGAGGCAGAAAAAGCAGAAAAGTCATCAGGAGTTGTTTACGGCAAACTGCATTCTGAAGGTGTTCCAGATGGGTGGCCCTCCTCTAGATGAGGAATTTGAATCTCTTCCTCCAGGTCTATCCCTCCACCGTGTTGGTCTCAACAATTCCATTTCTGCTTGTCAAGGGGATCAAGGACCAATTAAAAGGAGAAAGGTTTCTGAGAGTGCAATTGGAAGTCACCCTGAATCAAATAAGAAAGCACCATTGAAAAAACACGGTATTGGAAAGGGTTTAATGACAGTATGGAGGGCTACAAATCCAGACGCTGCAGAAGTTCCTATTGGCTTTGTTGTTGGCAATAAGCCATGCAAAACCCTAAACAATGCTGGAAGGAAAAAGAATAAACTACAGAATGTAAGAAATAAAATACAAGAAAAGAGGAAGGCTTTCATTCAAAGAAGAGTGGTGAAATATAAGCAGGATGCAAGTCAGAATCAACCATGGAAGGAAAAATGTGAACTTGTTTTGGGTAGATTTATATCTGAGGAGGAACTTGATCGATTGTCATTGTTAATTGATGATGAAGAGCTAGAGATGAGAGAGTTACAAGCAAGGGCAGATATGCATATGTGTTCTGATCATCTTGCTGTCAGTGGAATTCTTGGCTGCTCTCTTTGTAAAGATGTGCTGTCTAAGTTTCCACCAGATACTGTTAAGATGAAGAAGCCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAACTGTCAAGAAACTTTTTAAGGTATTCCATTTTCTTTATACATATGCTACTGTTGTTAATATTTGCCCCTTCACTCTTGATGAGTTGGCTCAAGCCTTTCATGATAAGGACTCAATGCTTCTTGGAAAGATTCATGTGGCCCTTCTTACACTTCTTCTATCTGACATTGAAGTGGAACTTACTGGCGGATTTCCGCCTCATCTAAATAAGTCATGCAATTTTCTTGCATTGCTTCACTCGGTTGAAAATCAAGAATATTCTCTGGACTTCTGGAAAAGATCACTTAATCCACTTACGTGGATAGAAATACTCCGACAAGTTTTGGTTGCCGCTGGCTTTGGTTCAAAACAAGTTTCTTTGCGAAGAGAAGCACTTAACAAGGAACTGAATCTCCTAGTAAAGTATGGCTTATGCGCTGGCACTTTGAAGGGCGAGTTGTTTAAAATTTTGTTAGCACAAGGAAATAATGGGTCAAAAGTATCTGAACTAGCAAAGTCAATGCAGATTGTTGAATTGAACCTTGTCAGCACAACAGAGGAGCTTGAATCTTTAATATATTCAACCCTGTCGAGTGATATTACTTTATTTGAAAAGATCTCATCATCTGCATATCGACTGCGCATGAGCTTGTTTAAGGACATTGATGACATTCAGTCAGACACAGAAGACTCTGGAAGTGTAGATAATGAACTTAATGACGGTAATACATGGAGCAGCAGTGATGATTTTGAATGTGATTCAGGGAACTCCAACTTAAGGAAATTGAAGTGGGTAAGCAATTCTACGATGAAAAAAAATATGCTCAAAGCATCAACTGAAATTGACGAGAGCCATCCAGGAGAAGTGTGGCTATTTGGACTGATGGAGGGTGAATATTCGGATTTGAGCATTGAAGAAAAGTTGAATGCAATAGTGGCTCTGACTGATCTTCTTTCTTCTGGATCTAGCATTAGGATGAAGGATCCAGCAGAAGTTACTGTTGATTACAGTTCGAGCATCCAGTTACGTGGTTCTGGAGCAAAAATAAAGAGGTCGCTAGTAAGGAAGCCTGGGTCATGTTGGAATCAGATTGGACCAATGCATTATGTTAGAGAAGGGCATTCATCATTGAATCCTCAGTCCTATGCAGTGGATTCCTCATTATTATTCTCAAATATCTACACTGAGGAGGAATCCTTTGAGAATGGGAACAAAGCAACTGAAATAGGTTTAACCAATTCACACCCCATTCAATCAGTGTTTTTGGGATCTGACCGTAGGTACAATAGATACTGGCTTTTCTTGGGGCCTTGCAATGTGTGTGACCCAGGCCATAGGAGAGTCTACTTTGAATCTTCTGAAGATGGTCACTGGGAAGTGATCGATAATGATGAGGCTTTATGTGCTTTGTTGTCATTTTTGGATGATAGAGGCAAACGGGAGGCACTTCTTGTTGCATCCTTGGAGAAGCTGAAAGCCCCTCTTTGCAGAGCTATGTCCAGGACGATGGTCAACCATACTAGAATATGTCATATGTCAAATTCTGATCAATCTGATCTTGATAGGATCACAGGGGATAGTTACTCTCCAGTATCTGATGTAGATAACCTGAGCCTGATTGAGACGGTCTGTGACTCTTTACCTTCAGCTGGGGCTGTGGTAATTGAAGCTGCTAAGAAGGGAGCAGAAAAAATGCAAAAGTGGCTCCGTCTCCAAGCATACGATTCATGGATTTGGAATTCCTTTTATTTAAATCTCAATGTTGTGAAATATGGTAGAAGGTCTTATATTGATTCTCTGGCCAGATGTGAGAGTTGTCATGATTTATTCTGGAGAGATGAGAGACACTGTAAAATTTGCCATTTGACATTTGAGCTTGACTTTGATCTTGAAGAAAGATATGCAATCCACACAGCCACATGCAGGCAGAAAGAAGACAGTAACACTTCTCCAAATTACAAAATCTTATCATCCCAGATCCAATCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGTAGATGCGCTGGTGGGTGCGTGGAGGAAGTCTGCTCATAAGCTGTGGGTTAGACGACTCAGACGCACTTCAACTTTAACTGAGCTTTTTCAGGTTGTTGCTGATTTCGTTGGTGCTATCAATGAGGATTGGTTGTTTCAATCTAGTTTTCCTGATGGTGTGGTTGATAAACTCATTGCATCTTTTGCGTCTATGCACCATACTTCATCAGCTCTTGCTCTATGGTTAGTGAAATTGGATGCCATAATTGCCCCTTACCTGGACAAAGTCCAGCCTCCAAAGAAGCAGGACATTACTAAGAGAAACTTCTCTGGTGGAGTTTAA 3291 0.4075 MKVQRKTASQLQALNNFYKEEKYPTPRAIVDFAGALGLTYKQVQYWFVEQRRREKENGVLVPSCSSSLISRSVRRQKKQKSHQELFTANCILKVFQMGGPPLDEEFESLPPGLSLHRVGLNNSISACQGDQGPIKRRKVSESAIGSHPESNKKAPLKKHGIGKGLMTVWRATNPDAAEVPIGFVVGNKPCKTLNNAGRKKNKLQNVRNKIQEKRKAFIQRRVVKYKQDASQNQPWKEKCELVLGRFISEEELDRLSLLIDDEELEMRELQARADMHMCSDHLAVSGILGCSLCKDVLSKFPPDTVKMKKPICLQPWDSSPETVKKLFKVFHFLYTYATVVNICPFTLDELAQAFHDKDSMLLGKIHVALLTLLLSDIEVELTGGFPPHLNKSCNFLALLHSVENQEYSLDFWKRSLNPLTWIEILRQVLVAAGFGSKQVSLRREALNKELNLLVKYGLCAGTLKGELFKILLAQGNNGSKVSELAKSMQIVELNLVSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSLFKDIDDIQSDTEDSGSVDNELNDGNTWSSSDDFECDSGNSNLRKLKWVSNSTMKKNMLKASTEIDESHPGEVWLFGLMEGEYSDLSIEEKLNAIVALTDLLSSGSSIRMKDPAEVTVDYSSSIQLRGSGAKIKRSLVRKPGSCWNQIGPMHYVREGHSSLNPQSYAVDSSLLFSNIYTEEESFENGNKATEIGLTNSHPIQSVFLGSDRRYNRYWLFLGPCNVCDPGHRRVYFESSEDGHWEVIDNDEALCALLSFLDDRGKREALLVASLEKLKAPLCRAMSRTMVNHTRICHMSNSDQSDLDRITGDSYSPVSDVDNLSLIETVCDSLPSAGAVVIEAAKKGAEKMQKWLRLQAYDSWIWNSFYLNLNVVKYGRRSYIDSLARCESCHDLFWRDERHCKICHLTFELDFDLEERYAIHTATCRQKEDSNTSPNYKILSSQIQSLKAAIYAIESVMPVDALVGAWRKSAHKLWVRRLRRTSTLTELFQVVADFVGAINEDWLFQSSFPDGVVDKLIASFASMHHTSSALALWLVKLDAIIAPYLDKVQPPKKQDITKRNFSGGV 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1294 1096 Coils Coil 193 220 - -
Prci14g1294 1096 SUPERFAMILY Homeodomain-like 4 57 IPR009057 -
Prci14g1294 1096 SMART HOX_1 1 61 IPR001356 GO:0003677
Prci14g1294 1096 SMART testlast3 320 379 IPR018501 -
Prci14g1294 1096 Gene3D - 1 60 - -
Prci14g1294 1096 Pfam DDT domain 321 376 IPR018501 -
Prci14g1294 1096 Coils Coil 252 272 - -
Prci14g1294 1096 MobiDBLite consensus disorder prediction 540 565 - -
Prci14g1294 1096 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 607 639 IPR028942 -
Prci14g1294 1096 PANTHER HOMEOBOX PROTEIN SIX 211 1075 - -
Prci14g1294 1096 ProSiteProfiles 'Homeobox' domain profile. 1 57 IPR001356 GO:0003677
Prci14g1294 1096 CDD homeodomain 2 55 IPR001356 GO:0003677
Prci14g1294 1096 Pfam Homeodomain 5 55 IPR001356 GO:0003677
Prci14g1294 1096 ProSiteProfiles DDT domain profile. 320 379 IPR018501 -
Prci14g1294 1096 MobiDBLite consensus disorder prediction 549 565 - -
Prci14g1294 1096 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 732 805 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1294 Prci-Chr14 17520024 17530749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1294 208 1072 Homeobox Transcription Factor Family AT1G28420 26.942 4.77e-73 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci14g1294 WSD 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1294 - - gmx:100792062 1395.95