Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1286 ATGGCTGAGCTACCCAGCTCAGAGACTGGTACTTCCACCAACTGCTCTTCGCCTTCATCGTCTCCTTCGTCTCCCTCGTCATTATCCAACTCTTCTTCTTCGTCGTCGTCGTGGTCGTCGTCGTCGTCTTCTTCTTCTCCTTCTCAACAGAAGAAGCTCAAGCGAGCCAGAGATGAAAGTAACAATAACAGCAAGCACCCTGTTTACAGAGGAGTACGAATGCGAACATGGGGCAAATGGGTCTCTGAAATCCGCGAACCCAGAAAGAAAAATCGGATCTGGCTCGGCACTTTCGCCACGCCGGAGATGGCTGCCCGTGCCCACGACGTCGCCGCCCTCAGCATTAAAGGAACCTCCGCCATCCTCAACTTCCCCGAGCTCGCAGCTTCCCTGCCCCGACCCGCCTCTAAATCGCCCCGAGATGTTCAGGCCGCCGCCGCCAAAGCTGCTTCCATGGAGATACTCAACATCAGTCCCATCCCCACTTCCTCCTCGTCGTCGTCCTCTGCCCCGTCTTCTTCCTCGGGCGATGTCCCCACCACCCCAGAGGAACTGGGCGAGATAGTGCAGCTCCCGTCACTGGGCTCTAGCTTCCAAGAACCCGACCCGAATAACGAGTTCGTGTTTTTCGACCCGGTAGAGGGGTGGTCCTATCCTCATCCATGGTATCACAGCCTTTATGATGATGTTGAGAACAAGTTATACTGTGGCGGGTATTTCTCTGGGGATCACAGTTCAATGCAAGAAGAAGAAACAGAGGGTTTGATTCTTTGTGGCTTTGAGGGCTCATTGTGGCAACATTAG 804 0.5435 MAELPSSETGTSTNCSSPSSSPSSPSSLSNSSSSSSSWSSSSSSSSPSQQKKLKRARDESNNNSKHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALSIKGTSAILNFPELAASLPRPASKSPRDVQAAAAKAASMEILNISPIPTSSSSSSSAPSSSSGDVPTTPEELGEIVQLPSLGSSFQEPDPNNEFVFFDPVEGWSYPHPWYHSLYDDVENKLYCGGYFSGDHSSMQEEETEGLILCGFEGSLWQH 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1286 267 MobiDBLite consensus disorder prediction 160 180 - -
Prci14g1286 267 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
Prci14g1286 267 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
Prci14g1286 267 SUPERFAMILY DNA-binding domain 68 126 IPR016177 GO:0003677
Prci14g1286 267 FunFam Ethylene-responsive transcription factor 2 67 126 - -
Prci14g1286 267 CDD AP2 69 127 IPR001471 GO:0003700|GO:0006355
Prci14g1286 267 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Prci14g1286 267 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Prci14g1286 267 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
Prci14g1286 267 MobiDBLite consensus disorder prediction 1 70 - -
Prci14g1286 267 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Prci14g1286 267 MobiDBLite consensus disorder prediction 1 50 - -
Prci14g1286 267 MobiDBLite consensus disorder prediction 160 182 - -
Prci14g1286 267 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 42 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1286 Prci-Chr14 17287956 17289736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1286 34 229 AP2-EREBP Transcription Factor Family AT5G11590 59.804 1.46e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci14g1286 AP2 9.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1286 K09286 - qsa:O6P43_003984 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1286 14 17287956 17289736 Prci14g1286 14 17287956 17289736 ECH