Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1267 ATGAGTCTCCCAGATAAAAATAGAGAGAAGAGGAAGATGATGAGCAAGAAAGAGAGAGGTTCAGTGCTTGTAATTTTCAGATATGCTCAGTGGACTGATCTTGTGCTTATGTTGTTGGGTGCTTTGGGAGCAATAGGAGACGGCATGTCTACAAACGTTTTGCTTGTGTTTGCTAGCCGTATCATGAACAGCTTGGGTTATGGTAACACTCAACAACAACATAATAATGGTAGTGGGAATTTTTCCATGACCGAGGTTGAGAAGTGCAGTTTATATTTTGTTTACCTGGGATTAGCAGTCATGGCTTTGGCCTTCATGGAAGGGTATTGTTGGAGCAAGACAAGCGAGAGGCAAGTATTGAGAATTCGGTCCAAGTATTTGGAGGCTGTGCTGAGACAAGAAGTGGGATTCTTCAATTCACAAGAAGCAACTACTTCAGACATCATAAATAGCATATCAAAGGACACTTCTCTCTTCCAAGAACTCCTCAGTGAAAAGGTGCCGCTTTTTTTGATGCATTCATCATCATTCATCTCAGGGATCGCATTCTCCACGTACTTCTCATGGAGACTAGCCATAGTATCATACCCAACGCTGCTTCTTCTGATAATACCAGGAATGCTTTATGGGAAATACTTAATCTACTTATCAAATAAGTCCCACAAAGACTATGGCAAGGCAAACGCCATAGTAGAGCAGGCTCTAAGCTCTATAAAGACTGTTTATTCATTCACAGCAGAGAGAAGAATCATGGAGAGATATTCAGCAATACTTGACAGAATCTCAAGGCTTGGAATCAGACAAGGCATAGCCAAGGGTTTGGCCGTGGGAAGCACTGGTCTATCTTTTGCTATATGGGCCTTTCTGGCTTGGTATGGAAGTTGTTTGGTTATGTTCAAAGGTGAAAGTGGAGGAAGGATTTACGCGGCTGGCATTTCCTTCATCATGAGCGGACTATCACTTGGAGTTGCACTTCCTGACCTAAAGTACTTCACAGAAGCATCTGTTGCAGCATCAAGATTATTTGATATGATTGACCGAGTACCAGCAATTGATTGTGAAGATACAAGAGGGCTTGTATTAGATTGCGTAACTGGCAAGTTAGAATTTGAACATGTGAGATTCACATACCCTTCACGTCCAGATACAATTGTTCTTAAGGATTTCAATCTCACAGTTGAAGCTGGCACGACTGTGGCTCTTGTTGGTGCTAGTGGAAGTGGTAAATCCACTGCAATAGGATTAGTTCAACGATTTTATGATGCAGATGAAGGTTTTGTGAAGGTTGATGGTGTAGACATAAGAAGCCTACAATTGAAATGGATAAGAGGAAAAATGGGACTTGTGAGTCAAGAACCAGCACTGTTTGGGACTTCAATAAAGGAGAATATAATGTTTGGCAAACCAGATGCTACAATGGAGGAAGCAATTGCTGCAGCCATGGCTGCCAATGCTCATAACTTCATTAGGCAGCTTCCTGAAGGTTATGAGACCAAGATTGGAGAAAGAGGGGCACTTTTATCAGGCGGACAAAAGCAGCGAATAGCAATTGCAAGGGCCATCATAAAAAATCCTGTGGTTCTCTTGCTTGATGAAGCAACCAGTGCTCTTGACTCTGAATCAGAACTACTGGTTCAGAATGCCCTTGATCAGGCCTCCATGGGAAGGACCACTTTGGTTGTTTCCCACAAGCTATCGACAGTTCGAAATGCAGACCTCATAGCAGTTGTCAATTGTGGCTGCATCATTGAAACAGGTACACACAATGAACTCCTTAGACATGAAAATGGGCAATATGCAAAGCTAGCGAAGATGCAATTAAGTTGTGAAGAACAAGTGCTGTACCCAGACCAAGTGATTTCTTCTGTAGCAAGAAGCAGTGCTGGCAGATCAAGTACTGCAAGGTCAAGCCCTTTAATTTTCCCAAAGTCACCATTGCCTGATAAGACCCCACCACTTGAATCTCACCCTCCACCTTCTCTACTACGTCTTCTTTCTCTAAATGCTCCTGAATGGAAGCAAGGTTTGGTTGGAAGCCTCTCAGCTATAGCCTTTGGCGCAATTCAACCCATATATGCCTTAGCCATTGGAGGTATGATTTCTGCATTTTTTCTTGAAAGCCATGAGGAAATGCGTCATAGGATCAGAACTTACTCTTTTATTTTCTCGTCGTTATCCCTTGCTTCTATAGTTCTCAATCTCTTCCAGCATTATAATTTTGCATATATGGGAGAGAAATTAACAAAAAGGGTTAGATTACAACTGCTAGAAAAGATCTTAACCTTTGAAACTGCCTGGTTTGATGAGGAGCAAAACTCTAGCGGAGCCTTATGCTCAAGGTTGAGCAATGAGGCTTCCATGGTGAAGTCACTTGTTGCAGATCGCCTCTCTTTAATAGTTCAAACAACTTCTGCTGTCACGATTGCAATGATCATAGGACTTGTTGTGGCATGGAAGCTTGCTCTTGTTTTGATAGCTGTACAACCACTAACAATACTTTGCTTCTATACGAGAAAAGTACTGCTCTCCACACTTTCAACTAATTTTGTCAAGGCTCAGAATCATAGCACACAAATTGCAGTGGAAGCTGTTTATAATCATAAAATTGTCATTTCCTTTGGAAGCAATAGGAAAGTTGTACAACTATTTGATGAAGCTCAAGAGGCGCCCAGGAAGGAAGCCAGAAAGAAGTCTTGGCTAGCTGGGATTGGAATGGGTTCTGCTCAATGTCTAACTTTCATGTCATGGGCTTTGGATTTCTGGTATGGTGGGACATTAGTACAGAAAGGAGAAATATCAGCGGGGGATGTATTCAAGACTTTCTTTGTATTGGTGAGCACAGGCAAAGTCATAGCTGAAGCTGGAAGCATGACTTCTGATCTTGCCAAGGGCTCAGCAGCAGTGGCATCTGTTTTTGCAATTCTTGATAGACGATCATTAATCCCCAAGGATGGGAATGGCATTAATGGGCGTAAGTTGTTGAAAATGAGAGGAAAGATAGAGATGAAGGATGTTGATTTTGCTTACCCAAGCAGGCCAGGGACTCTAATATTGAGAAAATTTTGCATGGAGGTGAAGTCAGGAACAAGCATTGGAGTAGTAGGGAAAAGTGGGAGTGGAAAATCAACAGTAATAGCTTTGATTCAGAGATTCTATGACGTGCAAAGAGGGTTTATCAAAGTGGATAGCATAGACATAAGAGAACTAGACATTCAATGGTACAGAAAGCACACAGCACTGGTCAGCCAAGAGCCTATGATCTACTCAGGAAGCATAAGAGACAACATTTTATTTGGCAAGCAAGATGATGCAACAGAGAGTGAAGTTGTGGAGGCTGGTAGAGCTGCTAATGCTCATAACTTCATCTCATCACTGAAAGATGGATATGAAACAGAATGTGGAGAAAGAGGAGTACAACTATCAGGAGGGCAAAAACAGAGAATAGCAATCGCAAGAGCCATAATTAGAAACCCAACAATACTTCTGCTAGATGAAGCGACTAGTGCACTGGACGTTCAGTCAGAACAAGTTGTACAAGAAGCGCTTGATAGAATAATGGTGGGTAGAACTACCATCGTGGTGGCTCACAGGCTTAACACTATTAAAGATCTTCAATCGATCGCTTATGTTTCAGACGGCAAGGTTCTTGAACAAGGGACCTATTCACAGCTTTGGCACAAGAGAGGTGCTTTCTTCAACCTTGCCAACCATCAAACTTAG 3720 0.4218 MSLPDKNREKRKMMSKKERGSVLVIFRYAQWTDLVLMLLGALGAIGDGMSTNVLLVFASRIMNSLGYGNTQQQHNNGSGNFSMTEVEKCSLYFVYLGLAVMALAFMEGYCWSKTSERQVLRIRSKYLEAVLRQEVGFFNSQEATTSDIINSISKDTSLFQELLSEKVPLFLMHSSSFISGIAFSTYFSWRLAIVSYPTLLLLIIPGMLYGKYLIYLSNKSHKDYGKANAIVEQALSSIKTVYSFTAERRIMERYSAILDRISRLGIRQGIAKGLAVGSTGLSFAIWAFLAWYGSCLVMFKGESGGRIYAAGISFIMSGLSLGVALPDLKYFTEASVAASRLFDMIDRVPAIDCEDTRGLVLDCVTGKLEFEHVRFTYPSRPDTIVLKDFNLTVEAGTTVALVGASGSGKSTAIGLVQRFYDADEGFVKVDGVDIRSLQLKWIRGKMGLVSQEPALFGTSIKENIMFGKPDATMEEAIAAAMAANAHNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVVLLLDEATSALDSESELLVQNALDQASMGRTTLVVSHKLSTVRNADLIAVVNCGCIIETGTHNELLRHENGQYAKLAKMQLSCEEQVLYPDQVISSVARSSAGRSSTARSSPLIFPKSPLPDKTPPLESHPPPSLLRLLSLNAPEWKQGLVGSLSAIAFGAIQPIYALAIGGMISAFFLESHEEMRHRIRTYSFIFSSLSLASIVLNLFQHYNFAYMGEKLTKRVRLQLLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRLSLIVQTTSAVTIAMIIGLVVAWKLALVLIAVQPLTILCFYTRKVLLSTLSTNFVKAQNHSTQIAVEAVYNHKIVISFGSNRKVVQLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGEISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKGSAAVASVFAILDRRSLIPKDGNGINGRKLLKMRGKIEMKDVDFAYPSRPGTLILRKFCMEVKSGTSIGVVGKSGSGKSTVIALIQRFYDVQRGFIKVDSIDIRELDIQWYRKHTALVSQEPMIYSGSIRDNILFGKQDDATESEVVEAGRAANAHNFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKDLQSIAYVSDGKVLEQGTYSQLWHKRGAFFNLANHQT 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1267 1239 FunFam ABC multidrug transporter SitT 990 1239 - -
Prci14g1267 1239 FunFam ABC transporter B family member 4 358 612 - -
Prci14g1267 1239 CDD ABC_MTABC3_MDL1_MDL2 369 606 - -
Prci14g1267 1239 ProSitePatterns ABC transporters family signature. 507 521 IPR017871 GO:0005524|GO:0016887
Prci14g1267 1239 Pfam ABC transporter 1021 1168 IPR003439 GO:0005524
Prci14g1267 1239 SUPERFAMILY ABC transporter transmembrane region 659 976 IPR036640 GO:0005524|GO:0016020
Prci14g1267 1239 FunFam ABC transporter B family member 1 24 361 - -
Prci14g1267 1239 FunFam Putative ABC transporter B family member 8 641 985 - -
Prci14g1267 1239 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 341 - -
Prci14g1267 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1000 1237 IPR003439 GO:0005524
Prci14g1267 1239 CDD ABC_6TM_Pgp_ABCB1_D2_like 668 981 - -
Prci14g1267 1239 ProSitePatterns ABC transporters family signature. 1140 1154 IPR017871 GO:0005524|GO:0016887
Prci14g1267 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 604 IPR003439 GO:0005524
Prci14g1267 1239 SMART AAA_5 1027 1220 IPR003593 GO:0016887
Prci14g1267 1239 SMART AAA_5 395 587 IPR003593 GO:0016887
Prci14g1267 1239 PANTHER ABC TRANSPORTER B FAMILY 9 688 IPR039421 -
Prci14g1267 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 992 1238 IPR027417 -
Prci14g1267 1239 Gene3D - 990 1239 IPR027417 -
Prci14g1267 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 333 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci14g1267 1239 Gene3D ABC transporter type 1, transmembrane domain 25 903 IPR036640 GO:0005524|GO:0016020
Prci14g1267 1239 SUPERFAMILY ABC transporter transmembrane region 25 352 IPR036640 GO:0005524|GO:0016020
Prci14g1267 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 676 963 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci14g1267 1239 Gene3D - 358 621 IPR027417 -
Prci14g1267 1239 Pfam ABC transporter 386 535 IPR003439 GO:0005524
Prci14g1267 1239 Pfam ABC transporter transmembrane region 680 946 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci14g1267 1239 Pfam ABC transporter transmembrane region 41 305 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci14g1267 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 606 IPR027417 -
Prci14g1267 1239 MobiDBLite consensus disorder prediction 630 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1267 Prci-Chr14 16720114 16731146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1267 74 614 Calmodulin-binding Proteins AT2G36910 36.015 2.71e-98 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1267 K05658 - gmx:100801088 1903.26