Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1266 ATGAGTCTCCCAGATAAAAATAGAGAGAAGAGGAAGATGATGAGCAAGAAAGAGAGAGGTTCAGTGCTTGTAATTTTCAGATATGCTCAGTGGACTGATCTTGTGCTTATGTTGTTGGGTGCTTTGGGAGCAATAGGAGACGGCATGTCTACAAACGTTTTGCTTGTGTTTGCTAGCCGTATCATGAACAGCTTGGGTTATGGTAACACTCAACAACAACATAATAATGGTAGTGGGAATTTTTCCATGACCGAGGTTGAGAAGTGCAGTTTATATTTTGTTTACCTGGGATTAGCAGTCATGGCTTTGGCCTTCATGGAAGGGTATTGTTGGAGCAAGACAAGCGAGAGGCAAGTATTGAGAATTCGGTCCAAGTATTTGGAGGCTGTGCTGAGACAAGAAGTGGGATTCTTCAATTCACAAGAAGCAACTACTTCAGACATCATAAATAGCATATCAAAGGACACTTCTCTCTTCCAAGAACTCCTCAGTGAAAAGCAGGTGCCGCTTTTTTTGATGCATTCATCATCATTCATCTCAGGGATCGCATTCTCCACGTACTTCTCATGGAGACTAGCCATAGTATCATACCCAACGCTGCTTCTTCTGATAATACCAGGAATGCTTTATGGGAAATACTTAATCTACTTATCAAATAAGTCCCACAAAGACTATGGCAAGGCAAACGCCATAGTAGAGCAGGCTCTAAGCTCTATAAAGACTGTTTATTCATTCACAGCAGAGAGAAGAATCATGGAGAGATATTCAGCAATACTTGACAGAATCTCAAGGCTTGGAATCAGACAAGGCATAGCCAAGGGTTTGGCCGTGGGAAGCACTGGTCTATCTTTTGCTATATGGGCCTTTCTGGCTTGGTATGGAAGTTGTTTGGTTATGTTCAAAGGTGAAAGTGGAGGAAGGATTTACGCGGCTGGCATTTCCTTCATCATGAGCGGACTATCACTTGGAGTTGCACTTCCTGACCTAAAGTACTTCACAGAAGCATCTGTTGCAGCATCAAGATTATTTGATATGATTGACCGAGTACCAGCAATTGATTGTGAAGATACAAGAGGGCTTGTATTAGATTGCGTAACTGGCAAGTTAGAATTTGAACATGTGAGATTCACATACCCTTCACGTCCAGATACAATTGTTCTTAAGGATTTCAATCTCACAGTTGAAGCTGGCACGACTGTGGCTCTTGTTGGTGCTAGTGGAAGTGGTAAATCCACTGCAATAGGATTAGTTCAACGATTTTATGATGCAGATGAAGGTTTTGTGAAGGTTGATGGTGTAGACATAAGAAGCCTACAATTGAAATGGATAAGAGGAAAAATGGGACTTGTGAGTCAAGAACCAGCACTGTTTGGGACTTCAATAAAGGAGAATATAATGTTTGGCAAACCAGATGCTACAATGGAGGAAGCAATTGCTGCAGCCATGGCTGCCAATGCTCATAACTTCATTAGGCAGCTTCCTGAAGGTTATGAGACCAAGATTGGAGAAAGAGGGGCACTTTTATCAGGCGGACAAAAGCAGCGAATAGCAATTGCAAGGGCCATCATAAAAAATCCTGTGGTTCTCTTGCTTGATGAAGCAACCAGTGCTCTTGACTCTGAATCAGAACTACTGGTTCAGAATGCCCTTGATCAGGCCTCCATGGGAAGGACCACTTTGGTTGTTTCCCACAAGCTATCGACAGTTCGAAATGCAGACCTCATAGCAGTTGTCAATTGTGGCTGCATCATTGAAACAGGTACACACAATGAACTCCTTAGACATGAAAATGGGCAATATGCAAAGCTAGCGAAGATGCAATTAAGTTGTGAAGAACAAGTGCTGTACCCAGACCAAGTGATTTCTTCTGTAGCAAGAAGCAGTGCTGGCAGATCAAGTACTGCAAGGTCAAGCCCTTTAATTTTCCCAAAGTCACCATTGCCTGATAAGACCCCACCACTTGAATCTCACCCTCCACCTTCTCTACTACGTCTTCTTTCTCTAAATGCTCCTGAATGGAAGCAAGGTTTGGTTGGAAGCCTCTCAGCTATAGCCTTTGGCGCAATTCAACCCATATATGCCTTAGCCATTGGAGGTATGATTTCTGCATTTTTTCTTGAAAGCCATGAGGAAATGCGTCATAGGATCAGAACTTACTCTTTTATTTTCTCGTCGTTATCCCTTGCTTCTATAGTTCTCAATCTCTTCCAGCATTATAATTTTGCATATATGGGAGAGAAATTAACAAAAAGGGTTAGATTACAACTGCTAGAAAAGATCTTAACCTTTGAAACTGCCTGGTTTGATGAGGAGCAAAACTCTAGCGGAGCCTTATGCTCAAGGTTGAGCAATGAGGCTTCCATGGTGAAGTCACTTGTTGCAGATCGCCTCTCTTTAATAGTTCAAACAACTTCTGCTGTCACGATTGCAATGATCATAGGACTTGTTGTGGCATGGAAGCTTGCTCTTGTTTTGATAGCTGTACAACCACTAACAATACTTTGCTTCTATACGAGAAAAGTACTGCTCTCCACACTTTCAACTAATTTTGTCAAGGCTCAGAATCATAGCACACAAATTGCAGTGGAAGCTGTTTATAATCATAAAATTGTCATTTCCTTTGGAAGCAATAGGAAAGTTGTACAACTATTTGATGAAGCTCAAGAGGCGCCCAGGAAGGAAGCCAGAAAGAAGTCTTGGCTAGCTGGGATTGGAATGGGTTCTGCTCAATGTCTAACTTTCATGTCATGGGCTTTGGATTTCTGGTATGGTGGGACATTAGTACAGAAAGGAGAAATATCAGCGGGGGATGTATTCAAGACTTTCTTTGTATTGGTGAGCACAGGCAAAGTCATAGCTGAAGCTGGAAGCATGACTTCTGATCTTGCCAAGGGCTCAGCAGCAGTGGCATCTGTTTTTGCAATTCTTGATAGACGATCATTAATCCCCAAGGATGGGAATGGCATTAATGGGCGTAAGTTGTTGAAAATGAGAGGAAAGATAGAGATGAAGGATGTTGATTTTGCTTACCCAAGCAGGCCAGGGACTCTAATATTGAGAAAATTTTGCATGGAGGTGAAGTCAGGAACAAGCATTGGAGTAGTAGGGAAAAGTGGGAGTGGAAAATCAACAGTAATAGCTTTGATTCAGAGATTCTATGACGTGCAAAGAGGGTTTATCAAAGTGGATAGCATAGACATAAGAGAACTAGACATTCAATGGTACAGAAAGCACACAGCACTGGTCAGCCAAGAGCCTATGATCTACTCAGGAAGCATAAGAGACAACATTTTATTTGGCAAGCAAGATGATGCAACAGAGAGTGAAGTTGTGGAGGCTGGTAGAGCTGCTAATGCTCATAACTTCATCTCATCACTGAAAGATGGATATGAAACAGAATGTGGAGAAAGAGGAGTACAACTATCAGGAGGGCAAAAACAGAGAATAGCAATCGCAAGAGCCATAATTAGAAACCCAACAATACTTCTGCTAGATGAAGCGACTAGTGCACTGGACGTTCAGTCAGAACAAGTTGTACAAGAAGCGCTTGATAGAATAATGGTGGGTAGAACTACCATCGTGGTGGCTCACAGGCTTAACACTATTAAAGATCTTCAATCGATCGCTTATGTTTCAGACGGCAAGGTTCTTGAACAAGGGACCTATTCACAGCTTTGGCACAAGAGAGATCTATGCGTGCTGGTCGGTGGAGAGAGAGCTTGA 3723 0.423 MSLPDKNREKRKMMSKKERGSVLVIFRYAQWTDLVLMLLGALGAIGDGMSTNVLLVFASRIMNSLGYGNTQQQHNNGSGNFSMTEVEKCSLYFVYLGLAVMALAFMEGYCWSKTSERQVLRIRSKYLEAVLRQEVGFFNSQEATTSDIINSISKDTSLFQELLSEKQVPLFLMHSSSFISGIAFSTYFSWRLAIVSYPTLLLLIIPGMLYGKYLIYLSNKSHKDYGKANAIVEQALSSIKTVYSFTAERRIMERYSAILDRISRLGIRQGIAKGLAVGSTGLSFAIWAFLAWYGSCLVMFKGESGGRIYAAGISFIMSGLSLGVALPDLKYFTEASVAASRLFDMIDRVPAIDCEDTRGLVLDCVTGKLEFEHVRFTYPSRPDTIVLKDFNLTVEAGTTVALVGASGSGKSTAIGLVQRFYDADEGFVKVDGVDIRSLQLKWIRGKMGLVSQEPALFGTSIKENIMFGKPDATMEEAIAAAMAANAHNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVVLLLDEATSALDSESELLVQNALDQASMGRTTLVVSHKLSTVRNADLIAVVNCGCIIETGTHNELLRHENGQYAKLAKMQLSCEEQVLYPDQVISSVARSSAGRSSTARSSPLIFPKSPLPDKTPPLESHPPPSLLRLLSLNAPEWKQGLVGSLSAIAFGAIQPIYALAIGGMISAFFLESHEEMRHRIRTYSFIFSSLSLASIVLNLFQHYNFAYMGEKLTKRVRLQLLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRLSLIVQTTSAVTIAMIIGLVVAWKLALVLIAVQPLTILCFYTRKVLLSTLSTNFVKAQNHSTQIAVEAVYNHKIVISFGSNRKVVQLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGEISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKGSAAVASVFAILDRRSLIPKDGNGINGRKLLKMRGKIEMKDVDFAYPSRPGTLILRKFCMEVKSGTSIGVVGKSGSGKSTVIALIQRFYDVQRGFIKVDSIDIRELDIQWYRKHTALVSQEPMIYSGSIRDNILFGKQDDATESEVVEAGRAANAHNFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKDLQSIAYVSDGKVLEQGTYSQLWHKRDLCVLVGGERA 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1266 1240 SUPERFAMILY ABC transporter transmembrane region 25 353 IPR036640 GO:0005524|GO:0016020
Prci14g1266 1240 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524|GO:0016887
Prci14g1266 1240 SUPERFAMILY ABC transporter transmembrane region 660 977 IPR036640 GO:0005524|GO:0016020
Prci14g1266 1240 Gene3D - 991 1234 IPR027417 -
Prci14g1266 1240 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 605 IPR003439 GO:0005524
Prci14g1266 1240 CDD ABC_MTABC3_MDL1_MDL2 370 607 - -
Prci14g1266 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 993 1230 IPR027417 -
Prci14g1266 1240 FunFam ABC transporter B family member 19 991 1235 - -
Prci14g1266 1240 MobiDBLite consensus disorder prediction 631 658 - -
Prci14g1266 1240 Gene3D ABC transporter type 1, transmembrane domain 25 906 IPR036640 GO:0005524|GO:0016020
Prci14g1266 1240 Pfam ABC transporter 387 536 IPR003439 GO:0005524
Prci14g1266 1240 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci14g1266 1240 FunFam ABC transporter B family member 4 359 613 - -
Prci14g1266 1240 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 677 964 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci14g1266 1240 Pfam ABC transporter transmembrane region 681 947 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci14g1266 1240 Pfam ABC transporter transmembrane region 41 306 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci14g1266 1240 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 342 - -
Prci14g1266 1240 Pfam ABC transporter 1022 1169 IPR003439 GO:0005524
Prci14g1266 1240 PANTHER ABC TRANSPORTER B FAMILY 9 689 IPR039421 -
Prci14g1266 1240 CDD ABC_6TM_Pgp_ABCB1_D2_like 669 982 - -
Prci14g1266 1240 Gene3D - 359 622 IPR027417 -
Prci14g1266 1240 ProSitePatterns ABC transporters family signature. 1141 1155 IPR017871 GO:0005524|GO:0016887
Prci14g1266 1240 SMART AAA_5 396 588 IPR003593 GO:0016887
Prci14g1266 1240 SMART AAA_5 1028 1221 IPR003593 GO:0016887
Prci14g1266 1240 FunFam Putative ABC transporter B family member 8 642 986 - -
Prci14g1266 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 607 IPR027417 -
Prci14g1266 1240 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1001 1238 IPR003439 GO:0005524
Prci14g1266 1240 FunFam ABC transporter B family member 1 24 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1266 Prci-Chr14 16720114 16733314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1266 74 615 Calmodulin-binding Proteins AT2G36910 35.949 1.02e-96 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1266 K05658 - gmx:100801088 1879.37