Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1251 ATGTATTTCAGAATGTTAAATTCTCATTCTATTTGCTTGCTGCTTCTTCTTGTTCTTGTTCTTCTCCTGCAAAATCCTCCAACATTGTGCCATACCAAGGGCTTCAGACCCAGGCGTTATTCGGGTCTCGGGCTATCCACCAACAGGACCCAATTCCAAAATTCGGAGCAGCAATTCATGAGATGGGTTAACTTTGTTGGTAGCCTCAAGCACTCTGTTTTTAAGACTGCAAAAAACAAGCTTTTTCCTTCTTACACTCTTCACGTCTCTAAGAATCCGGCCGCAGCAGATTTTGCTACCATTCAAGAAGCCATTGATTCTCTTCCTTCTATCAATCTCGTAAGAGTTATCATTAAGGTTCATGCAGGGGTTTACACTGAGAAAGTGAACACCCCTCCCATGAAATCCTTCATAACCATAGAAGGAGAAGGAGCTGATAACACCATAGTTCAATGGGGTGACACAGCTCAAACACCAGGTGCTAGAGGACAGCCATTAGGAACATATGGTTCTGCAACATTTGCAGTGAACTCACCTTATTTCATAGCCAAGAACATAACATTCAAAAACACAACCCCGGTTCCGCCACCAGGAGCAATAGGGAAACAAGCAGTGGCATTGAGAATATCAGCAGACACAGCATCATTTTACGGATGCAAATTCCTAGGAGCACAGGACACATTGTATGACCATGTGGGTAGGCATTATTACAAGGATTGTTACATTGAAGGCTCAGTTGATTTCATATTCGGGAACGCCCTGTCTCTTTTTGAGGGATGTCACGTGCATGCAATAGCACAGAACATAGGGGCCTTAACTGCACAAGGAAGGAGCAGCATGTTGGAGGACACAGGGTTCTCATTTGTGCACTGTAAGGTCACTGGCTCAGGAGCACTATACCTAGGAAGGGCTTGGGGTCCTTTTTCTCGTGTGGTTTTTGCTTACACTTACATGGACAACATCATCATTCCCAAGGGCTGGTATAACTGGGGAGACCCTAACCGTGAAATGACAATATTTTATGGACAGTACAAATGCACGGGACAAGGAGCTAGCTTTGCAGGCAGAGTATCATGGTGCAAAGAACTCACCGATGAGGAAGCTAAGCCTTTTATCTCACTTAGTTTCATAGATGGCAATGAGTGGACCAGATTGTAG 1158 0.4439 MYFRMLNSHSICLLLLLVLVLLLQNPPTLCHTKGFRPRRYSGLGLSTNRTQFQNSEQQFMRWVNFVGSLKHSVFKTAKNKLFPSYTLHVSKNPAAADFATIQEAIDSLPSINLVRVIIKVHAGVYTEKVNTPPMKSFITIEGEGADNTIVQWGDTAQTPGARGQPLGTYGSATFAVNSPYFIAKNITFKNTTPVPPPGAIGKQAVALRISADTASFYGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNIGALTAQGRSSMLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTIFYGQYKCTGQGASFAGRVSWCKELTDEEAKPFISLSFIDGNEWTRL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1251 385 FunFam Pectinesterase 83 385 - -
Prci14g1251 385 ProSitePatterns Pectinesterase signature 2. 242 251 IPR033131 -
Prci14g1251 385 Gene3D - 83 385 IPR012334 -
Prci14g1251 385 SUPERFAMILY Pectin lyase-like 82 383 IPR011050 -
Prci14g1251 385 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 75 383 - -
Prci14g1251 385 Pfam Pectinesterase 95 380 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1251 Prci-Chr14 14515757 14521062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1251 15 382 Carbohydrate Esterase AT5G47500 43.631 2.14e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1251 K01051 - qsa:O6P43_007857 652.514