Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1243 ATGGAGAAGACCGTTGTTCTGTCTTTTCTCTTCCTTGTCCTCCATTTAGCACCAGCAAAAGCTTCTCTTAATGTCGGTGTCGGTGTCGGTGTCGGTGTCGGTATTGGTATCGGAAATGGTGGCGGCCGCGGTGGAGGAGGTGGTGGAGCAAATAGCCCACCAGAGCCGTCTGGACCATCATTGTCAAAGATGGGCGTAGCTTACAAAAGTCTCCAAGCATGGAAATCAGCGATTACTGATGACCCATTGAGGATTCTTGATACTTGGGTAGGCTCTAACGTTTGTTCTTATAAAGGAGTGTTTTGTTCATCAGATTCGTCATCAGGTGGTCCTGCTGTTACAGGAATAGATCTCAACCATGGAAATATTGAAGGAACTCTAGTCAACGACCTATATTTACTCACTGATCTATCTCTTTTTCACCTCAATACCAATAGATTCACTGGTACACTTCCTGAAACATTCCAAGACCTTTCATCTCTTGAAGAATTAGACCTAAGCAACAACCAGTTTTCAGGTGATTTTCCCTCAGTTATCTTAAACATGCCAAGTCTTATCTACTTGGACCTCAGATTCAATTCTTTCTCTGGACCCCTCCCGGATCAACTCTTTAGTAAAAATCTTGATGCAATACTTGTCAACAACAATCAGTTCCAAGGCGAAATCCCACAGAATCTGGCTAGTTCCTCAGCTTCTGTGATCAACCTAGCTAACAACAAGTTCACTGGAAACATCCCAATAACTAGTTTAGGGTTGGTGCGTGGTTATAATTCTAAGCTGAAGGAGATTCTATTCTTGAATAACCAGTTAACAGGTTGTATTCCTCAAGGAATGGGATTGTTCAGAGACGTGCAAGTTCTTGATGCGAGCTTTAATTCATTGGTGGGTCATTTGCCAGAAACTCTTTCTTGCTTGCAAGACATAGAAGTGCTTAACTTGGCTCATAATCAGCTTTCTGGGGAACTGTCAGATGTGATATGCTCGTTGAGGAGTTTAGTGAATCTTACTGTGGCGTACAATTTCTTTAATCGGTTGAGTCAGGAATGTTCGAGGCTTTTGATTCGGAATGTGGGTTTTGATTTCTCCGACAATTGTATTCCTGGGAGGGACATGCAAAGACCTCAACCAGAATGTTCTTTGATCCCAGGTGGTAGCCTTAGTTGTCTGAGAATCCCCATACCAAAGCCTCTTGATTGTGCTTCATTGACGATAATTCCGCCTTCCCCTTGA 1230 0.4309 MEKTVVLSFLFLVLHLAPAKASLNVGVGVGVGVGIGIGNGGGRGGGGGGANSPPEPSGPSLSKMGVAYKSLQAWKSAITDDPLRILDTWVGSNVCSYKGVFCSSDSSSGGPAVTGIDLNHGNIEGTLVNDLYLLTDLSLFHLNTNRFTGTLPETFQDLSSLEELDLSNNQFSGDFPSVILNMPSLIYLDLRFNSFSGPLPDQLFSKNLDAILVNNNQFQGEIPQNLASSSASVINLANNKFTGNIPITSLGLVRGYNSKLKEILFLNNQLTGCIPQGMGLFRDVQVLDASFNSLVGHLPETLSCLQDIEVLNLAHNQLSGELSDVICSLRSLVNLTVAYNFFNRLSQECSRLLIRNVGFDFSDNCIPGRDMQRPQPECSLIPGGSLSCLRIPIPKPLDCASLTIIPPSP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1243 409 SUPERFAMILY L domain-like 73 366 - -
Prci14g1243 409 FunFam Leucine-rich repeat extensin-like protein 1 68 228 - -
Prci14g1243 409 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 61 391 - -
Prci14g1243 409 Gene3D Ribonuclease Inhibitor 231 373 IPR032675 -
Prci14g1243 409 Gene3D Ribonuclease Inhibitor 68 230 IPR032675 -
Prci14g1243 409 Pfam Leucine rich repeat 137 194 IPR001611 GO:0005515
Prci14g1243 409 PRINTS Leucine-rich repeat signature 305 318 - -
Prci14g1243 409 PRINTS Leucine-rich repeat signature 161 174 - -
Prci14g1243 409 Pfam Leucine rich repeat N-terminal domain 69 103 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1243 Prci-Chr14 14217400 14218810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1243 63 390 Leucine-rich Repeat extension Gene Families AT3G24480 49.851 1.99e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1243 - - cit:102629568 511.531