Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1238 ATGAGCAGTTTGAAGAACTCTGATCTGATAGACGCCAAGCTGGAAGAGAATCAGTCGTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTCAATCCAAGCCTGACTGGGTGGGTCTACCAGCAGGAGTTAAATTTGATCCAACAGACCAAGAACTCATAGAACACCTCGAAGCCAAAGTCGAATCCAACCACATGATCAAATCTCACCCTCTCATCGACGAGTTCATTCCCACCATTGAAGGCGAAGATGGAATCTGCTATACCCATCCAGAGAAACTCCCAGGAGTAACAAGGGATGGATTGAGCAGGCACTTCTTTCACAGGCCATCGAAGGCATACACGACAGGGACGAGGAAGAGAAGGAAAATCCAGAACGAGTGTGACTTACAAGGAGGAGAGACAAGATGGCACAAGACAGGAAAAACCAGACCAGTTCTGGTGAATGGAAAACAAAAAGGTTGCAAGAAAATCCTCGTACTGTACACAAACTTTGGGAAGAACAGAAAGCCTGAGAAGACCAACTGGGTGATGCATCAGTATCATCTGGGACAGCACGAGGAAGAGAAAGAAGGAGAGCTTGTCGTCTCCAAAATATTCTTCCAGACACAGCCCAGACAATGCACCACCACTACCAACAACAACAACGTTAACACTGATAATAATAATAATTGGTCGGCGGCGGCGGAGAGAAGCACGACGACCGGTGAGGCGAGCGGAGATCAGCCGAACAGTAATAGTAGGAGAGAGAGTACAAGTGGAAGTTGTTCTTCTAAAGAGATAGTCACTACGACGACTCATCACTCTCATCATGACGTCTCTAATACTGTTGCCGTTGGTGTTCCTCCATTAACGTCCTTCACTGCTTTGGATATTCATCACCACCTCAAATCCGACCATTTCAGCTTCATCCCATTCAGAAAAACCTTCGATGAGGTGGGAATAGGAGCTGCTTCGAGAGGAAGAGAAATGGTGCAGCCTTCAGGTTCATCAGGAGAAGGGAATCATCATCATCTTCATCATCATCAACATCATCAACAACAACAACATATTGCAGAAAATAATAATACAGCATTTCATCATCATATCAGTAGGCCTTCACATCCTATTTCTAACAAAATCTCTCCACCTCCTCCTTCACACCTTACCTCCGTCATCCTTGACGATGTCACCAGATTAATGCTCCAAAATGATCATTTCCAGCAACATCATAAACCAGAAGGAAGGTCTGCGTCTGGCTTGGAGGAACTAATTATGGGATGCACTACTTCAACTAATTCTAAAGAGGATTCATCTATCACACATTATCCACAAGAACCAGAATGGTTGACGTACCCTTCATACTGGCCTGATTCTGACAATCCAGGTCATCATCATCAGTAG 1386 0.4524 MSSLKNSDLIDAKLEENQSCGSKQCPGCGHKFQSKPDWVGLPAGVKFDPTDQELIEHLEAKVESNHMIKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVLVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFFQTQPRQCTTTTNNNNVNTDNNNNWSAAAERSTTTGEASGDQPNSNSRRESTSGSCSSKEIVTTTTHHSHHDVSNTVAVGVPPLTSFTALDIHHHLKSDHFSFIPFRKTFDEVGIGAASRGREMVQPSGSSGEGNHHHLHHHQHHQQQQHIAENNNTAFHHHISRPSHPISNKISPPPPSHLTSVILDDVTRLMLQNDHFQQHHKPEGRSASGLEELIMGCTTSTNSKEDSSITHYPQEPEWLTYPSYWPDSDNPGHHHQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1238 461 MobiDBLite consensus disorder prediction 321 351 - -
Prci14g1238 461 SUPERFAMILY NAC domain 36 203 IPR036093 GO:0003677|GO:0006355
Prci14g1238 461 Gene3D NAC domain 50 208 IPR036093 GO:0003677|GO:0006355
Prci14g1238 461 Pfam No apical meristem (NAM) protein 42 184 IPR003441 GO:0003677|GO:0006355
Prci14g1238 461 MobiDBLite consensus disorder prediction 208 275 - -
Prci14g1238 461 ProSiteProfiles NAC domain profile. 41 203 IPR003441 GO:0003677|GO:0006355
Prci14g1238 461 MobiDBLite consensus disorder prediction 208 274 - -
Prci14g1238 461 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 337 IPR044799 GO:0003700
Prci14g1238 461 FunFam NAC domain-containing protein 73 50 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1238 Prci-Chr14 14041330 14045737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1238 4 455 NAC Transcription Factor Family AT5G56620 49.057 1.18e-131 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci14g1238 NAM 3.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1238 - - gmx:100791884 619.002