Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1188 ATGGCAAGAAAGTGCTCGCAATGTGGGAAAATAGGGCATAATTCTAGGACTTGCACATCTTTCAGAGGGATTAGTTCTACTTCTGTAGGAATTCGTCTCTTTGGTGTTCATCTTGAAATTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCATCTTCTTCATCATCAACACCATCTTCTTCTCCTTCTTCTTGTGTTGTTCCCATGTCGACGAAAAGCTTGAGCATGGATTCTCTGCCTTCATCTTCATCCTCATCATCGTTCTCCAATAATTCATCAAGAATCACCATTGATGAAAACTCCAAGAGATCCTCTGTTGACTATCTATCAGATGGTCTGATGCATGTCGCAGCACAAGACAGAAGAAAAGGAGTGGCTTGGAGTGAAGATGAACACAGAAAATTTCTGGTAGGGCTTGAGAAGCTAGGAAAAGGAGATTGGAGGGGAATCTCCAGAAATTATGTGAAAACAAGAACACCAACTCAAGTAGCTAGTCATGCTCAGAAATATTTTCTTCGTCTCACTGCTATCAATAAGAAGAGACGATCAAGCCTCTTTGACATGATGGGCAGCAGCAATAGCAGCAGAGGCAACATGGGAGGTCAATTATTGTATAGCAGCTCAGTGGGAAAACAGGAGGAGGATATTAAATCTGGAATCGCCAAGTGCAGTGAAAAAGATGATGATGGGGAGACTGAGACTAGCCTGACATTGATGGGCCTAAGCTTGCTTGAAAAGGGAATCAAATCTGAAACAATAGTGCCCACGTGGCAGCATAATTCCCAGATGATGAATTCTTCTTCTTCACCAACATTATCACCTCATGATGATCTGGATCTCACACTTGCAGGACCAAGGGCATTGAAACATAATGAACCATCATCATCTTCTTTCCTTCTAAGCTCTATTTGTGTCACTTGA 921 0.418 MARKCSQCGKIGHNSRTCTSFRGISSTSVGIRLFGVHLEISSSSSSSSSSSSSSSSTPSSSPSSCVVPMSTKSLSMDSLPSSSSSSSFSNNSSRITIDENSKRSSVDYLSDGLMHVAAQDRRKGVAWSEDEHRKFLVGLEKLGKGDWRGISRNYVKTRTPTQVASHAQKYFLRLTAINKKRRSSLFDMMGSSNSSRGNMGGQLLYSSSVGKQEEDIKSGIAKCSEKDDDGETETSLTLMGLSLLEKGIKSETIVPTWQHNSQMMNSSSSPTLSPHDDLDLTLAGPRALKHNEPSSSSFLLSSICVT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1188 306 SMART sant 123 173 IPR001005 -
Prci14g1188 306 NCBIfam myb-like DNA-binding domain, SHAQKYF class 123 173 IPR006447 GO:0003677
Prci14g1188 306 Pfam Myb-like DNA-binding domain 126 171 IPR001005 -
Prci14g1188 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 175 IPR017930 -
Prci14g1188 306 CDD SANT 126 171 IPR001005 -
Prci14g1188 306 ProSiteProfiles SANT domain profile. 127 175 IPR017884 -
Prci14g1188 306 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
Prci14g1188 306 Gene3D - 125 178 - -
Prci14g1188 306 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Prci14g1188 306 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Prci14g1188 306 PANTHER TRANSCRIPTION FACTOR KUA1 3 260 - -
Prci14g1188 306 FunFam transcription factor MYB1R1 125 176 - -
Prci14g1188 306 MobiDBLite consensus disorder prediction 42 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1188 Prci-Chr14 12263398 12265338 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci14g1188 Myb_DNA-binding 8.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1188 - - pcin:129293374 483.026