Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1187 ATGGCAAGAAAGTGCTCGCAATGTGGGAAAATAGGGCATAATTCTAGGACTTGCACATCTTTCAGAGGGATTAGTTCTACTTCTGTAGGAATTCGTCTCTTTGGTGTTCATCTTGAAATTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCATCTTCTTCATCATCAACACCATCTTCTTCTCCTTCTTCTTGTGTTGTTCCCATGTCGACGAAAAGCTTGAGCATGGATTCTCTGCCTTCATCTTCATCCTCATCATCGTTCTCCAATAATTCATCAAGAATCACCATTGATGAAAACTCCAAGAGATCCTCTGTTGACTATCTATCAGATGGTCTGATGCATGTCGCAGCACAAGACAGAAGAAAAGATGAACACAGAAAATTTCTGGTAGGGCTTGAGAAGCTAGGAAAAGGAGATTGGAGGGGAATCTCCAGAAATTATGTGAAAACAAGAACACCAACTCAAGTAGCTAGTCATGCTCAGAAATATTTTCTTCGTCTCACTGCTATCAATAAGAAGAGACGATCAAGCCTCTTTGACATGATGGGCAGCAGCAATAGCAGCAGAGGCAACATGGGAGGTCAATTATTGTATAGCAGCTCAGTGGGAAAACAGGAGGAGGATATTAAATCTGGAATCGCCAAGTGCAGTGAAAAAGATGATGATGGGGAGACTGAGACTAGCCTGACATTGATGGGCCTAAGCTTGCTTGAAAAGGGAATCAAATCTGAAACAATAGTGCCCACGTGGCAGCATAATTCCCAGATGATGAATTCTTCTTCTTCACCAACATTATCACCTCATGATGATCTGGATCTCACACTTGCAGGACCAAGGGCATTGAAACATAATGAACCATCATCATCTTCTTTCCTTCTAAGCTCTATTTGTGTCACTTGA 903 0.4153 MARKCSQCGKIGHNSRTCTSFRGISSTSVGIRLFGVHLEISSSSSSSSSSSSSSSSTPSSSPSSCVVPMSTKSLSMDSLPSSSSSSSFSNNSSRITIDENSKRSSVDYLSDGLMHVAAQDRRKDEHRKFLVGLEKLGKGDWRGISRNYVKTRTPTQVASHAQKYFLRLTAINKKRRSSLFDMMGSSNSSRGNMGGQLLYSSSVGKQEEDIKSGIAKCSEKDDDGETETSLTLMGLSLLEKGIKSETIVPTWQHNSQMMNSSSSPTLSPHDDLDLTLAGPRALKHNEPSSSSFLLSSICVT 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1187 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 169 IPR017930 -
Prci14g1187 300 SMART sant 117 167 IPR001005 -
Prci14g1187 300 Pfam Myb-like DNA-binding domain 123 165 IPR001005 -
Prci14g1187 300 SUPERFAMILY Homeodomain-like 123 169 IPR009057 -
Prci14g1187 300 FunFam transcription factor MYB1R1 121 170 - -
Prci14g1187 300 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Prci14g1187 300 PANTHER TRANSCRIPTION FACTOR KUA1 3 254 - -
Prci14g1187 300 CDD SANT 123 165 IPR001005 -
Prci14g1187 300 Gene3D - 122 172 - -
Prci14g1187 300 MobiDBLite consensus disorder prediction 42 94 - -
Prci14g1187 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 123 167 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1187 Prci-Chr14 12263395 12265338 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci14g1187 Myb_DNA-binding 9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1187 - - pcin:129293374 463.381