Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1181 ATGGTAGCCGGAGGTTTCTCCTCAGTCGTTCCCAGGTTGAAGAGGGAAGAATGCAAACGAACAAAGCACGATTCCAACTTCTCTGATTGGAAGATTCTCATTGGGCCTTCAGATTGGGAGGATTATTCTAGAGGGAAAGAAGGGTCGGCTAGATACAGAATTCACAACCTCCCAGAAAAATCGAGCCCAGGAGTTTATGAGCTTGGTATTGCTGTGTCTCGCATTGGTTTAGGGCGTAACGTTTACAAGCTTCATCCTAACCGTATAGTTGTGGCTTACCTTGGAAAGGCTGACAATGTGAGAACAAGACTCCAACAGTATGGCCGAACCGGAGCTCATTTGAGCAATACCTGCTTTACTTCTGATCCAGATGACAACAATCCTGCTTCTATCCATAAAGGGCAGGGATTTTTTGAGGAAATATTTTCAGAAGGCTATGCAATTATCTATAGATGGGCTCCTATGCAAAACAAAGAAGATGCCAGGAAAACGGAAAGTCAGTTGCTCTGTGTATTTGATTATGCATGGAACACGTGTAATAATGGAACCCGGCGCCCAGATGATATTCTTCAGAAGATCAATAAAGTTGCTTTAGGTCCGACAACATTTTCAAACATGACCAGGTTTCTTCAACCTTTCACTCAGAAGCGAGTGGGTATCCGAATCAAATCAAGCAGTATGCCTTTGCCAGATGGCGAATTACAAGAAATAGACAGAGGCAACAATAATTTCTTATCTCGAGTATTTAAATTTAGCAGATCAAATCCTAGGTTAGTTCAAGATGTCCCTGCTATCATTGAGGAGAATACTACGACAAGATTCTGTGGAGTGGTCTTGAGTGATGGTTCTATTTGTAGAAAACCGCCAGCTGAAAGAAGAATGAGGTGTGTAGAGCACAAAGGAATGAGAATAAATGGGGCCACTTCTAAAAGGACAGTGAAATCAGAGAATCTTCTGAGCCTTGAACCCAATGTACAATTCCAACAAAAGAGCGAAGGCTATGGTGAAGAACATGATGTGAAAGACCCTCCAATAATTGCAGTTGAGGATCCTCTTGATGGAAACATCGCTATTATGTGTGGAATCATTTTGAATGATGGCACTTGTTGTAGAAGACCACCTGCTAGAGGGAGAAAGAGATGTCATGAGCACAAAGGGAAGAGGATCCACGTGTCTATGTATAAATCAGCAATAATTGTAAATTCACAATTTCTGCAAAATGTTGTATCAGAATCTGATGATGTGAAAAATCCTGAAAAAATCGCAGTTGAGAGTTCTCTTGACAAGAGAATTACCGGTATATGTGGAATCATTTTGAAGGATGGCTCTCCTTGCAGAAGACCACCAGTTAAAGGGAGGAAAAGGTGCCTTGAGCACAAAGGGAAGAGAATCTATTGCTCATAG 1404 0.4174 MVAGGFSSVVPRLKREECKRTKHDSNFSDWKILIGPSDWEDYSRGKEGSARYRIHNLPEKSSPGVYELGIAVSRIGLGRNVYKLHPNRIVVAYLGKADNVRTRLQQYGRTGAHLSNTCFTSDPDDNNPASIHKGQGFFEEIFSEGYAIIYRWAPMQNKEDARKTESQLLCVFDYAWNTCNNGTRRPDDILQKINKVALGPTTFSNMTRFLQPFTQKRVGIRIKSSSMPLPDGELQEIDRGNNNFLSRVFKFSRSNPRLVQDVPAIIEENTTTRFCGVVLSDGSICRKPPAERRMRCVEHKGMRINGATSKRTVKSENLLSLEPNVQFQQKSEGYGEEHDVKDPPIIAVEDPLDGNIAIMCGIILNDGTCCRRPPARGRKRCHEHKGKRIHVSMYKSAIIVNSQFLQNVVSESDDVKNPEKIAVESSLDKRITGICGIILKDGSPCRRPPVKGRKRCLEHKGKRIYCS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1181 467 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 353 417 IPR038909 GO:0003677|GO:0006355
Prci14g1181 467 Pfam GIY-YIG domain-containing protein 27 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1181 Prci-Chr14 12164432 12167683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1181 344 464 HRT Transcription Factor Family AT5G56780 38.889 6.82e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Prci14g1181 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1181 - - pcin:129292928 769.229