Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1179 ATGGTAGCCGGAGGTTTCTCCTCAGTCGTTCCCAGGTTGAAGAGGGAAGAATGCAAACGAACAAAGCACGATTCCAACTTCTCTGATTGGAAGATTCTCATTGGCCCTTCAGATTGGGAGGATTATTCTAGAGGGAAAGAAGGGTCAGCTAGATACAGAATTCACAACCTCCCAGAAGAATCGAGCCCAGGAGTTTATGAGCTTGGTATTGCTGTGTCTCCCATTGGTTTAGGGCGTAACGTTCACAAGCTTCATCCTAACCGTATAGTTGGGGTTTACCTTGGAAAGGCTGACAATGTGAGAACGAGACTCCAACAGTATGGCCGAACTGGAGCTCATTTAAGCAAAAACTGCTTAACTTCTGATCCACACAACAATCCTGCTTCTATCCATAAAGGGCAGGGATTTTTTGAGGAAATATTTTCACAAGGTTATGCGATTAGCTATAGATGGGCTCCTATGCAAAACGTAGAAGACGCCAGGAAAACGGAATGTCAGTTTCTCTGGAGATATGATTATGCATGGAACGCGCGTAATAATGGAATCCGGCGCCCGGATGATATTCTTCAGGAGATTAATAAAGTTGTTTCAGGTCCTCCAACATTTTCAAGCATGACCAAGTTGCTTCAACCTTTCACCCAGAAGCAAGTGGGTATCCGAATCAAATCAAGCAGTATGCCTTGGCCAGATGGCAAATTACACGAAATAGACACAGGCAACTATAATTTCTTACCTGGAGTATTTAAATTTAGCAGATCAAATCCTAGGTTAGTTCAAGATGTCCCTGCTATCATTGAGGAGAATACTACTACAAGATTCTGTGGAGTGGTCTTGAGTGATGGTTCTGTTTGTAGAAGACCACCAGCTGAAAGAAGAATGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGCCCGCTTCCAAAAGGACAGTGAAATCAGAGAATCTTCTGAGCCTTGAACCCAGTGTACAATTCCAACAAAAGAGCGAAGGCTATGTGAAACACCCTCAAAAAATTGCAGTTGAAGATCCTTTTTATGGAAGCATTGCAAATATATGTGGAATCATTTTGAATGATGGCACTCGCTGTAGAAGACCACCTGTTGAAGGGAGACAGAGATGTCATGAACACAAAGGGAAGAGGATCGACGTGTCTATGTACGCATCTGCAACAATTGTAAAGCCACAGTTTCTGCAAAACGTTGCATCAGAATCTGACTACGTGAAAATTCCTAAAAATTTCACAGTTGAGAGTTCTCTTGACCAGAGAATTACCAGTATATGTGGAATCATTTTGAAGAATGGCTCTCCTTGTAGAAGACCACCAGTTAGGGGGAGAAAGCGATGTCATGAGCACAAAGGGAACAGGATCGACGCGTCTACGTACACATCTGCAACAATTGTAAATTCACAATTTCTACAAAACGTTGCATCAGAATCTGACTACGTGAAAATTCCTAAAAAATTCACAGTTGAGAGTTATCTTGACCAGAGAATTACCAGTATATGTGGAATCATTTTGAAGAATGGCTCTCCTTGTAGAAGACCACCAGTTAAAGGGAGGAAAAGGTGCCTTGAGCATAAAGGGAAGAGAATCTAG 1602 0.422 MVAGGFSSVVPRLKREECKRTKHDSNFSDWKILIGPSDWEDYSRGKEGSARYRIHNLPEESSPGVYELGIAVSPIGLGRNVHKLHPNRIVGVYLGKADNVRTRLQQYGRTGAHLSKNCLTSDPHNNPASIHKGQGFFEEIFSQGYAISYRWAPMQNVEDARKTECQFLWRYDYAWNARNNGIRRPDDILQEINKVVSGPPTFSSMTKLLQPFTQKQVGIRIKSSSMPWPDGKLHEIDTGNYNFLPGVFKFSRSNPRLVQDVPAIIEENTTTRFCGVVLSDGSVCRRPPAERRMRCVEHKGMRINGPASKRTVKSENLLSLEPSVQFQQKSEGYVKHPQKIAVEDPFYGSIANICGIILNDGTRCRRPPVEGRQRCHEHKGKRIDVSMYASATIVKPQFLQNVASESDYVKIPKNFTVESSLDQRITSICGIILKNGSPCRRPPVRGRKRCHEHKGNRIDASTYTSATIVNSQFLQNVASESDYVKIPKKFTVESYLDQRITSICGIILKNGSPCRRPPVKGRKRCLEHKGKRI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1179 533 Pfam GIY-YIG domain-containing protein 27 189 - -
Prci14g1179 533 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 417 472 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1179 Prci-Chr14 12150107 12167676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1179 6 533 HRT Transcription Factor Family AT5G56780 37.500 2.02e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Prci14g1179 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1179 - - pcin:129292928 1091.64