Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1173 ATGGCCTCGCCGACACCAGGCAGCTCTCGATCAGCTTCTTTCAGGGATGACGACTCCGACACTGCCAAGCTTGAAGGCACTGGTAGCTGGGATGCCATCGAATGGACCAAAATTGAGGAATATGGTGTTGTTCTTGTTAATAACAATGATGTGGGTACATTAATGGTTACAAATTTTCGCCTTCTATTTGTGAGTGAGAAAACCACAAAAGTTATTGCTCTAGGAACAATCCCACTTGCAACGATCGAGAAGTTTACCAAGATTGCTGTGAAGACTCAATCTACTCTTCGTCAGTTGGACAAAACACCATCACAAAGATTGCTCCAGGTCATTGGAAAGGATATGAGAATTATAGTTTTTGGTTTCAGATCTCGTACAAAACAGAGACGGGCAATATTTGAAACATTACTGAGATTGACAAAGCCTGCGAGACTTTGGGATCTCTATCCTTTTGTATCAAGGCCTTCTAGTTTAAGGAACACAAACCCAAAAGTTCGTTTACTGGATGAGTATTTTCGGCTTCTTGGGAAAGGATCTTATCGTGGATCAATTGATATGATCAGAAATGGGTCCTTTACCTTGTCCAATGCCTTGTGGAGAATAAGTAGTGTGAATTCCAACTATACCATGTGTCAAACTTATCCATTTGCATTGATTATTCCAAAGAGCATTAGTGATGATGAAGTGGTTCAGGCTTCCACTTTTCGAGCAAGATGCCGGCTGCCTGTAGTTTCATGGTGTGATCCTGGTACTGGTGCAGTCCTTGCTCGTTCATCACAACCCTTAGTTGGTCTTATGATGAATATGAGAAGCAACACAGATGAAAAGCTTGTGGCTGCACTTTGCAACAAACTGGATGATGGTTCACGGAGGAAGCTATACATTGCTGACGCGAGACCAAGGAAAAATGCATTAGCTAATGTGGCCATGGGGGGTGGTTCAGAGTCATCATCAAATTACTTTCAATGTGAGGTAGTCTATTTTGGGATAGACAACATCCATGCAATGAGAGATAGCTTTGCTAGACTCAGAGAGTACTTAGATACTTATGGCAAAGCATCATCAGATGGAATGTCATCTTTTTCGAGGAATGGTGGGTGGACATGGGGTGGAGGATTATTAAGTGGCATGTCTGCTTCAGTATCAACACTTGGGGACAGCGGATGGTTACTGCACATTCAAAATGTCTTGGCTGGTTCAGCTTGGATTGCTGCTCGTGTTGCTGTTGAAAAGGCTTCTGTGCTTGCACATTGCAGTGATGGATGGGATAGAACAACTCAGTTGGTTTCACTTGCTAGTTTGTTGCTTGATCCCTACTATCGGACATTCAAAGGGTTTCAGGCACTTGTCGAAAAAGACTGGTTAGCGTTTGGTCATCCATTCTCAGATCGTGTGGGAATGCCATCAGTCAGTGGAAGTGGCAACACACCTGAGTTGTCTTGGCAATCTCCTGGAAATCACCCATCATCACCCATGCGTCAGTCATCAGGAGCATTGAGTTCCCAACCTCCAACCTCTCACGCACAAACTTCGAACAACTACTCTCCAATTTTTCTGCAGTGGGTGGATTGTGTTTCACAACTGCTGCGGACATATCCTTTTGCTTTTGAGTTCTCTTCAGCTTTCCTGGTGGACTTCTTAGACTGTGTTCTTTCATGCCGCTTTGGAAACTTCTTATGTAATAGTGAGAAGGAAAGGCAACAATTGAATGTTTTTGAAGCATGTGGATGTTTGTGGGCATACCTAGCTGAGCTGCGGGCTTCAGAAAGTGGTTCTCATGTGCATTATAACCTCTTTTATGACCCGTCAAAGCATGATGGTCATCTTCGGCCTCCTGCAGCAGCTTTAGCCCCAACTTTGTGGCCCCAATTCCATCTGCGTTGGGTTTGTCCAGAAGAATCACAGGCTGGGGAGATTGAATCAGAATGTAGGAAGATGGCTTTAAATTTCTGTGAGATGAGGAAGGCTAAGGAAGAGGCGGAGAAGAAAGCCGACGAAATTGCAAATGCCATGGAATCACTGAAAGTAGAACGTAGAAACGAGAAGCAACTAAGAATATCAGCTATGAACATTGCCAAAAGAACAAACAAAGAAAATGTGGTGATGAAGAGGGCAATTCAGTCAATTGGACGCAAGGTTTACTTCTCTAGCAGCGATGATAGTATTGTTGATATTGAAATCTGTCCAGCTGAAGCAGCTCAAAACTTGAAGTATTCTCTAAACGGAAAGGAATTTGATGATAAAAAGGATTTATCTGCATCGGTAACAATTACAGAACATGACAATGATGCAAACATTGCTATTAGTCAAGTATGTGAAACTCTATGCCCGTTTCGTTCCCAAGATGGACATTGCAGGTGGCCCAATTCTGTTTGTGCTCAACGTGGCAGCCAGTTTGTTGGTCTAAAGGCAAACTTTGATGCTCTTGATCAACTCTTAATTAATGATGATTATTTCAAGCCTGAGTGA 2469 0.4305 MASPTPGSSRSASFRDDDSDTAKLEGTGSWDAIEWTKIEEYGVVLVNNNDVGTLMVTNFRLLFVSEKTTKVIALGTIPLATIEKFTKIAVKTQSTLRQLDKTPSQRLLQVIGKDMRIIVFGFRSRTKQRRAIFETLLRLTKPARLWDLYPFVSRPSSLRNTNPKVRLLDEYFRLLGKGSYRGSIDMIRNGSFTLSNALWRISSVNSNYTMCQTYPFALIIPKSISDDEVVQASTFRARCRLPVVSWCDPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCNKLDDGSRRKLYIADARPRKNALANVAMGGGSESSSNYFQCEVVYFGIDNIHAMRDSFARLREYLDTYGKASSDGMSSFSRNGGWTWGGGLLSGMSASVSTLGDSGWLLHIQNVLAGSAWIAARVAVEKASVLAHCSDGWDRTTQLVSLASLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGMPSVSGSGNTPELSWQSPGNHPSSPMRQSSGALSSQPPTSHAQTSNNYSPIFLQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQLNVFEACGCLWAYLAELRASESGSHVHYNLFYDPSKHDGHLRPPAAALAPTLWPQFHLRWVCPEESQAGEIESECRKMALNFCEMRKAKEEAEKKADEIANAMESLKVERRNEKQLRISAMNIAKRTNKENVVMKRAIQSIGRKVYFSSSDDSIVDIEICPAEAAQNLKYSLNGKEFDDKKDLSASVTITEHDNDANIAISQVCETLCPFRSQDGHCRWPNSVCAQRGSQFVGLKANFDALDQLLINDDYFKPE 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1173 822 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 194 629 IPR029021 -
Prci14g1173 822 ProSiteProfiles Myotubularin phosphatase domain. 176 625 IPR010569 -
Prci14g1173 822 MobiDBLite consensus disorder prediction 469 510 - -
Prci14g1173 822 SUPERFAMILY PH domain-like 39 152 - -
Prci14g1173 822 PANTHER MYOTUBULARIN-RELATED 40 732 IPR030564 -
Prci14g1173 822 Coils Coil 653 684 - -
Prci14g1173 822 Pfam Myotubularin-like phosphatase domain 169 567 IPR010569 -
Prci14g1173 822 CDD PTP-MTM-like 239 527 - -
Prci14g1173 822 MobiDBLite consensus disorder prediction 1 25 - -
Prci14g1173 822 Gene3D - 38 140 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1173 Prci-Chr14 12039902 12082645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1173 1 822 Protein tyrosine phosphatase (PTP) family AT3G10550 63.443 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1173 K18081 - gmx:100781842 1189.87