Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1172 ATGGCCTCGCCGACACCAGGCAGCTCTCGATCAGCTTCTTTCAGGGATGACGACTCCGACACTGCCAAGCTTGAAGGCACTGGTAGCTGGGATGCCATCGAATGGACCAAAATTGAGCCCATCATACGCCCCATTTCGCGGGAGAATCTAGATTTCTTGCTTGAGGCTGAGCAAGTCAAAGCCCAAGAATATGGTGTTGTTCTTGTTAATAACAATGATGTGGGTACATTAATGGTTACAAATTTTCGCCTTCTATTTGTGAGTGAGAAAACCACAAAAGTTATTGCTCTAGGAACAATCCCACTTGCAACGATCGAGAAGTTTACCAAGATTGCTGTGAAGACTCAATCTACTCTTCGTCAGTTGGACAAAACACCATCACAAAGATTGCTCCAGGTCATTGGAAAGGATATGAGAATTATAGTTTTTGGTTTCAGATCTCGTACAAAACAGAGACGGGCAATATTTGAAACATTACTGAGATTGACAAAGCCTGCGAGACTTTGGGATCTCTATCCTTTTGTATCAAGGCCTTCTAGTTTAAGGAACACAAACCCAAAAGTTCGTTTACTGGATGAGTATTTTCGGCTTCTTGGGAAAGGATCTTATCGTGGATCAATTGATATGATCAGAAATGGGTCCTTTACCTTGTCCAATGCCTTGTGGAGAATAAGTAGTGTGAATTCCAACTATACCATGTGTCAAACTTATCCATTTGCATTGATTATTCCAAAGAGCATTAGTGATGATGAAGTGGTTCAGGCTTCCACTTTTCGAGCAAGATGCCGGCTGCCTGTAGTTTCATGGTGTGATCCTGGTACTGGTGCAGTCCTTGCTCGTTCATCACAACCCTTAGTTGGTCTTATGATGAATATGAGAAGCAACACAGATGAAAAGCTTGTGGCTGCACTTTGCAACAAACTGGATGATGGTTCACGGAGGAAGCTATACATTGCTGACGCGAGACCAAGGAAAAATGCATTAGCTAATGTGGCCATGGGGGGTGGTTCAGAGTCATCATCAAATTACTTTCAATGTGAGGTAGTCTATTTTGGGATAGACAACATCCATGCAATGAGAGATAGCTTTGCTAGACTCAGAGAGTACTTAGATACTTATGGCAAAGCATCATCAGATGGAATGTCATCTTTTTCGAGGAATGGTGGGTGGACATGGGGTGGAGGATTATTAAGTGGCATGTCTGCTTCAGTATCAACACTTGGGGACAGCGGATGGTTACTGCACATTCAAAATGTCTTGGCTGGTTCAGCTTGGATTGCTGCTCGTGTTGCTGTTGAAAAGGCTTCTGTGCTTGCACATTGCAGTGATGGATGGGATAGAACAACTCAGTTGGTTTCACTTGCTAGTTTGTTGCTTGATCCCTACTATCGGACATTCAAAGGGTTTCAGGCACTTGTCGAAAAAGACTGGTTAGCGTTTGGTCATCCATTCTCAGATCGTGTGGGAATGCCATCAGTCAGTGGAAGTGGCAACACACCTGAGTTGTCTTGGCAATCTCCTGGAAATCACCCATCATCACCCATGCGTCAGTCATCAGGAGCATTGAGTTCCCAACCTCCAACCTCTCACGCACAAACTTCGAACAACTACTCTCCAATTTTTCTGCAGTGGGTGGATTGTGTTTCACAACTGCTGCGGACATATCCTTTTGCTTTTGAGTTCTCTTCAGCTTTCCTGGTGGACTTCTTAGACTGTGTTCTTTCATGCCGCTTTGGAAACTTCTTATGTAATAGTGAGAAGGAAAGGCAACAATTGAATGTTTTTGAAGCATGTGGATGTTTGTGGGCATACCTAGCTGAGCTGCGGGCTTCAGAAAGTGGTTCTCATGTGCATTATAACCTCTTTTATGACCCGTCAAAGCATGATGGTCATCTTCGGCCTCCTGCAGCAGCTTTAGCCCCAACTTTGTGGCCCCAATTCCATCTGCGTTGGGTTTGTCCAGAAGAATCACAGGCTGGGGAGATTGAATCAGAATGTAGGAAGATGGCTTTAAATTTCTGTGAGATGAGGAAGGCTAAGGAAGAGGCGGAGAAGAAAGCCGACGAAATTGCAAATGCCATGGAATCACTGAAAGTAGAACGTAGAAACGAGAAGCAACTAAGAATATCAGCTATGAACATTGCCAAAAGAACAAACAAAGAAAATGTGGTGATGAAGAGGGCAATTCAGTCAATTGGACGCAAGGTTTACTTCTCTAGCAGCGATGATAGTATTGTTGATATTGAAATCTGTCCAGCTGAAGCAGCTCAAAACTTGAAGTATTCTCTAAACGGAAAGGAATTTGATGATAAAAAGGATTTATCTGCATCGGTAACAATTACAGAACATGACAATGATGCAAACATTGCTATTAGTCAAGTATGTGAAACTCTATGCCCGTTTCGTTCCCAAGATGGACATTGCAGGTGGCCCAATTCTGTTTGTGCTCAACGTGGCAGCCAGTTTGTTGGTCTAAAGGCAAACTTTGATGCTCTTGATCAACTCTTAATTAATGATGATTATTTCAAGCCTGAGTGA 2538 0.4326 MASPTPGSSRSASFRDDDSDTAKLEGTGSWDAIEWTKIEPIIRPISRENLDFLLEAEQVKAQEYGVVLVNNNDVGTLMVTNFRLLFVSEKTTKVIALGTIPLATIEKFTKIAVKTQSTLRQLDKTPSQRLLQVIGKDMRIIVFGFRSRTKQRRAIFETLLRLTKPARLWDLYPFVSRPSSLRNTNPKVRLLDEYFRLLGKGSYRGSIDMIRNGSFTLSNALWRISSVNSNYTMCQTYPFALIIPKSISDDEVVQASTFRARCRLPVVSWCDPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCNKLDDGSRRKLYIADARPRKNALANVAMGGGSESSSNYFQCEVVYFGIDNIHAMRDSFARLREYLDTYGKASSDGMSSFSRNGGWTWGGGLLSGMSASVSTLGDSGWLLHIQNVLAGSAWIAARVAVEKASVLAHCSDGWDRTTQLVSLASLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGMPSVSGSGNTPELSWQSPGNHPSSPMRQSSGALSSQPPTSHAQTSNNYSPIFLQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQLNVFEACGCLWAYLAELRASESGSHVHYNLFYDPSKHDGHLRPPAAALAPTLWPQFHLRWVCPEESQAGEIESECRKMALNFCEMRKAKEEAEKKADEIANAMESLKVERRNEKQLRISAMNIAKRTNKENVVMKRAIQSIGRKVYFSSSDDSIVDIEICPAEAAQNLKYSLNGKEFDDKKDLSASVTITEHDNDANIAISQVCETLCPFRSQDGHCRWPNSVCAQRGSQFVGLKANFDALDQLLINDDYFKPE 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1172 845 Gene3D - 58 163 IPR011993 -
Prci14g1172 845 Pfam Myotubularin-like phosphatase domain 192 590 IPR010569 -
Prci14g1172 845 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 217 652 IPR029021 -
Prci14g1172 845 MobiDBLite consensus disorder prediction 492 533 - -
Prci14g1172 845 Coils Coil 676 707 - -
Prci14g1172 845 CDD PTP-MTM-like 262 550 - -
Prci14g1172 845 ProSiteProfiles Myotubularin phosphatase domain. 199 648 IPR010569 -
Prci14g1172 845 SUPERFAMILY PH domain-like 53 175 - -
Prci14g1172 845 MobiDBLite consensus disorder prediction 1 25 - -
Prci14g1172 845 PANTHER MYOTUBULARIN-RELATED 60 755 IPR030564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1172 Prci-Chr14 12039902 12082645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1172 1 845 Protein tyrosine phosphatase (PTP) family AT3G10550 64.269 0.0 1093
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1172 K18081 - gmx:100781842 1229.16