LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g1171	ATGGCCTCGCCGACACCAGGCAGCTCTCGATCAGCTTCTTTCAGGGATGACGACTCCGACACTGCCAAGCTTGAAGGCACTGGTAGCTGGGATGCCATCGAATGGACCAAAATTGAGCCCATCATACGCCCCATTTCGCGGGAGAATCTAGATTTCTTGCTTGAGGCTGAGCAAGTCAAAGCCCAAGAATATGGTGTTGTTCTTGTTAATAACAATGATGTGGGTACATTAATGGTTACAAATTTTCGCCTTCTATTTGTGAGTGAGAAAACCACAAAAGTTATTGCTCTAGGAACAATCCCACTTGCAACGATCGAGAAGTTTACCAAGATTGCTGTGAAGACTCAATCTACTCTTCGTCAGTTGGACAAAACACCATCACAAAGATTGCTCCAGGTCATTGGAAAGGATATGAGAATTATAGTTTTTGGTTTCAGATCTCGTACAAAACAGAGACGGGCAATATTTGAAACATTACTGAGATTGACAAAGCCTGCGAGACTTTGGGATCTCTATCCTTTTGTATCAAGGCCTTCTAGTTTAAGGAACACAAACCCAAAAGTTCGTTTACTGGATGAGTATTTTCGGCTTCTTGGGAAAGGATCTTATCGTGGATCAATTGATATGATCAGAAATGGGTCCTTTACCTTGTCCAATGCCTTGTGGAGAATAAGTAGTGTGAATTCCAACTATACCATGTGTCAAACTTATCCATTTGCATTGATTATTCCAAAGAGCATTAGTGATGATGAAGTGGTTCAGGCTTCCACTTTTCGAGCAAGATGCCGGCTGCCTGTAGTTTCATGGTGTGATCCTGGTACTGGTGCAGTCCTTGCTCGTTCATCACAACCCTTAGTTGGTCTTATGATGAATATGAGAAGCAACACAGATGAAAAGCTTGTGGCTGCACTTTGCAACAAACTGGATGATGGTTCACGGAGGAAGCTATACATTGCTGACGCGAGACCAAGGAAAAATGCATTAGCTAATGTGGCCATGGGGGGTGGTTCAGAGTCATCATCAAATTACTTTCAATGTGAGGTAGTCTATTTTGGGATAGACAACATCCATGCAATGAGAGATAGCTTTGCTAGACTCAGAGAGTACTTAGATACTTATGGCAAAGCATCATCAGATGGAATGTCATCTTTTTCGAGGAATGGTGGGTGGACATGGGGTGGAGGATTATTAAGTGGCATGTCTGCTTCAGTATCAACACTTGGGGACAGCGGATGGTTACTGCACATTCAAAATGTCTTGGCTGGTTCAGCTTGGATTGCTGCTCGTGTTGCTGTTGAAAAGGCTTCTGTGCTTGCACATTGCAGTGATGGATGGGATAGAACAACTCAGTTGGTTTCACTTGCTAGTTTGTTGCTTGATCCCTACTATCGGACATTCAAAGGGTTTCAGGCACTTGTCGAAAAAGACTGGTTAGCGTTTGGTCATCCATTCTCAGATCGTGTGGGAATGCCATCAGTCAGTGGAAGTGGCAACACACCTGAGTTGTCTTGGCAATCTCCTGGAAATCACCCATCATCACCCATGCGTCAGTCATCAGGAGCATTGAGTTCCCAACCTCCAACCTCTCACGCACAAACTTCGAACAACTACTCTCCAATTTTTCTGCAGTGGGTGGATTGTGTTTCACAACTGCTGCGGACATATCCTTTTGCTTTTGAGTTCTCTTCAGCTTTCCTGGTGGACTTCTTAGACTGTGTTCTTTCATGCCGCTTTGGAAACTTCTTATGTAATAGTGAGAAGGAAAGGCAACAATTGAATGTTTTTGAAGCATGTGGATGTTTGTGGGCATACCTAGCTGAGCTGCGGGCTTCAGAAAGTGGTTCTCATGTGCATTATAACCTCTTTTATGACCCGTCAAAGCATGATGGTCATCTTCGGCCTCCTGCAGCAGCTTTAGCCCCAACTTTGTGGCCCCAATTCCATCTGCGTTGGGTTTGTCCAGAAGAATCACAGGCTGGGGAGATTGAATCAGAATGTAGGAAGATGGCTTTAAATTTCTGTGAGATGAGGAAGGCTAAGGAAGAGGCGGAGAAGAAAGCCGACGAAATTGCAAATGCCATGGAATCACTGAAAGTAGAACGTAGAAACGAGAAGCAACTAAGAATATCAGCTATGAACATTGCCAAAAGAACAAACAAAGAAAATGTGGTGATGAAGAGGGCAATTCAGTCAATTGGACGCAAGGTTTACTTCTCTAGCAGCGATGATAGTATTGTTGATATTGAAATCTGTCCAGCTGAAGCAGCTCAAAACTTGAAGTATTCTCTAAACGGAAAGGAATTTGATGATAAAAAGGATTTATCTGCATCGGTAACAATTACAGAACATGACAATGATGCAAACATTGCTATTAGTCAAGTATGTGAAACTCTATGCCCGTTTCGTTCCCAAGATGGACATTGCAGGTGGCCCAATTCTGTTTGTGCTCAACGTGGCAGCCAGTTTGTTGGTCTAAAGGCAAACTTTGATGCTCTTGATCAACTCTTAATTAATGATGATTATTTCAAGCCTGAGTGA	2538	0.4326	MASPTPGSSRSASFRDDDSDTAKLEGTGSWDAIEWTKIEPIIRPISRENLDFLLEAEQVKAQEYGVVLVNNNDVGTLMVTNFRLLFVSEKTTKVIALGTIPLATIEKFTKIAVKTQSTLRQLDKTPSQRLLQVIGKDMRIIVFGFRSRTKQRRAIFETLLRLTKPARLWDLYPFVSRPSSLRNTNPKVRLLDEYFRLLGKGSYRGSIDMIRNGSFTLSNALWRISSVNSNYTMCQTYPFALIIPKSISDDEVVQASTFRARCRLPVVSWCDPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCNKLDDGSRRKLYIADARPRKNALANVAMGGGSESSSNYFQCEVVYFGIDNIHAMRDSFARLREYLDTYGKASSDGMSSFSRNGGWTWGGGLLSGMSASVSTLGDSGWLLHIQNVLAGSAWIAARVAVEKASVLAHCSDGWDRTTQLVSLASLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGMPSVSGSGNTPELSWQSPGNHPSSPMRQSSGALSSQPPTSHAQTSNNYSPIFLQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQLNVFEACGCLWAYLAELRASESGSHVHYNLFYDPSKHDGHLRPPAAALAPTLWPQFHLRWVCPEESQAGEIESECRKMALNFCEMRKAKEEAEKKADEIANAMESLKVERRNEKQLRISAMNIAKRTNKENVVMKRAIQSIGRKVYFSSSDDSIVDIEICPAEAAQNLKYSLNGKEFDDKKDLSASVTITEHDNDANIAISQVCETLCPFRSQDGHCRWPNSVCAQRGSQFVGLKANFDALDQLLINDDYFKPE	845

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g1171	845	Gene3D	-	58	163	IPR011993	-
	Prci14g1171	845	Pfam	Myotubularin-like phosphatase domain	192	590	IPR010569	-
	Prci14g1171	845	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	217	652	IPR029021	-
	Prci14g1171	845	MobiDBLite	consensus disorder prediction	492	533	-	-
	Prci14g1171	845	Coils	Coil	676	707	-	-
	Prci14g1171	845	CDD	PTP-MTM-like	262	550	-	-
	Prci14g1171	845	ProSiteProfiles	Myotubularin phosphatase domain.	199	648	IPR010569	-
	Prci14g1171	845	SUPERFAMILY	PH domain-like	53	175	-	-
	Prci14g1171	845	MobiDBLite	consensus disorder prediction	1	25	-	-
	Prci14g1171	845	PANTHER	MYOTUBULARIN-RELATED	60	755	IPR030564	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g1171	Prci-Chr14	12039902	12082645	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g1171	1	845	Protein tyrosine phosphatase (PTP) family	AT3G10550	64.269	0.0	1093

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g1171	K18081		-	gmx:100781842	1229.16

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