Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1170 ATGGCTGTAAATGAAGATGATACCGAACGAGAATATGTAACTCAAAAAGAGAAAAAACCTTCAGAGGAAGAGAAGAGGAAGAAGAAAATTGTACCTGGGAGTTTGATGAAAGCTCTAGTGAGGCCTGGAGGGGGTGACTCGACACCTTCAGATGGTGACCAGATCATATATCATTGTACAATTCGAACTTTAGATGGAGTAGTTGTGCAATCTACCCGATCAGAATGTGGAGGGAAGGGCATCCCAACAAGACATGTATTGGGCAAAAGCAAGATGCTGTTGGGCTTGTTAGAAGGCATTCCAACAATGTTGAAGGGTGAAGTGGCAATGTTTAAGATGAAGCCTCAGTTACATTATTGTGAGGATGATTGTCCTATTTCTGCTCCTGATGGGTTTCCAAAGGAAGATGAACTTCATTTTGAAATTGAGCTGATTGATTTTTTCAAAGCCAAGGTTGTTACTGATGACTTGGGAGTTATAAAAAAGGTAATATGTGAAGGGCAGGGTTGGGAATCTCCTCGAGAACCTTATGAAGTGAAAGCTTGGATATCAGCAAAGACAGTTGCAGGGAAGTTGATTGTGTCTCACACAGGGGGAGAGCCTTATTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATAGGAACGATGACACGGGAAGAGAAGGCTGTAATTTTTGTTCGTAGTCAATATCTAACTCAGTCTCCTCTGATGCCCCTGAATGATGATTATGAAGAAGTCCAGTTTGAAGTGGAGCTTGTCCACTTTATTCAAGTTAGAGACATGCTTGGAGATGGGCGCCTAATAAAACGTCGGATTCGTGATGGGAAAGGTGATTTTCCAATGGATTGCCCTCTTCATGACAGCCTACTTCGTGTTCATTACAAGGGTATGGTTCTTCATGAAGAAAAGAGGGTATTCTATGACTCAAGAGTTGATAATGATGGTCAACCACTGGAATTCTGTTCTGGAGAAGGGCTTGTGCCAGAGGGATTTGAAATGTGTGTACGTCTGATGCTGCCTGGAGAGGTAGCTCTCGTCACTTCCCCCCCAGACTTTGCTTATGATAAGTTTCCGAGGCCAGCAAATGTTCCTGAAGGTGCTGATATTCAATGGGAAATTGAGCTTCTTGGTTTTGAAATGCCAAAGGACTGGACTGGATTTGACTTCAAAAGTATAATGGATGATGCTGAGAAGATCAGGAACACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTGGCCAAGGCAAAGTATGAAAAGTTACTTCGAGAATTTAATCATGTCAACCCACAAGATGATGAGGAAGGAAAAGTATTTTCAGATACACGGAATTTGTTACATCTGAATGTGGCTGCATGCTTTCTGAAATTGGGAGAATTTAGGAAGTCCATTGAGTTTTGCAATAAGGTTTTGGAGGCAAACCCTGCACATGTCAAGGGTCTGTACCGTCGTGGAATGGCCTACATGGCAGCCGGCGATTTTGAAGAAGCAAAGACTGACTTCAACATGATGATAAAAGTTGACAAGTCAGCTGAACCCGATGCAACAGCAGCTCTTCTTAAACTGAAGCAGAAGGAGCAGGAAGCTGAGAAGAAGGCTCGAAAGCAATTTAAAGGCCTTTTCGACAAGAAACCTGGAGAAATAGCAGAAGTCATCACGGCTGAAGAGGATAAAGATCAGAAGACAAGTGAAACCAGCAAGGAGGAGGATGAAGGATATGGAGGTTCTGATGGAAGGAGCTCATCAGGGGATTCACATGATGAGGCTGCACCTGCTGCCCCTCAAATGGGGTGGTTCTCTCGCTTTTGGTCAAGCAGATTATTATCATCCTTTTGGCTTCGACGATGTACCATTCTATGA 1881 0.4306 MAVNEDDTEREYVTQKEKKPSEEEKRKKKIVPGSLMKALVRPGGGDSTPSDGDQIIYHCTIRTLDGVVVQSTRSECGGKGIPTRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYCEDDCPISAPDGFPKEDELHFEIELIDFFKAKVVTDDLGVIKKVICEGQGWESPREPYEVKAWISAKTVAGKLIVSHTGGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIFVRSQYLTQSPLMPLNDDYEEVQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGMVLHEEKRVFYDSRVDNDGQPLEFCSGEGLVPEGFEMCVRLMLPGEVALVTSPPDFAYDKFPRPANVPEGADIQWEIELLGFEMPKDWTGFDFKSIMDDAEKIRNTGNRLFKEGKYELAKAKYEKLLREFNHVNPQDDEEGKVFSDTRNLLHLNVAACFLKLGEFRKSIEFCNKVLEANPAHVKGLYRRGMAYMAAGDFEEAKTDFNMMIKVDKSAEPDATAALLKLKQKEQEAEKKARKQFKGLFDKKPGEIAEVITAEEDKDQKTSETSKEEDEGYGGSDGRSSSGDSHDEAAPAAPQMGWFSRFWSSRLLSSFWLRRCTIL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1170 626 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Prci14g1170 626 SUPERFAMILY FKBP-like 151 261 - -
Prci14g1170 626 FunFam Peptidylprolyl isomerase 263 387 - -
Prci14g1170 626 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 293 385 IPR001179 GO:0003755
Prci14g1170 626 Gene3D - 151 262 IPR046357 GO:0003755
Prci14g1170 626 SUPERFAMILY TPR-like 399 539 IPR011990 GO:0005515
Prci14g1170 626 ProSiteProfiles TPR repeat profile. 451 484 IPR019734 GO:0005515
Prci14g1170 626 Coils Coil 522 542 - -
Prci14g1170 626 Gene3D Tetratricopeptide repeat domain 390 545 IPR011990 GO:0005515
Prci14g1170 626 FunFam Peptidylprolyl isomerase 152 262 - -
Prci14g1170 626 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 177 258 IPR001179 GO:0003755
Prci14g1170 626 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 294 382 IPR001179 GO:0003755
Prci14g1170 626 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 46 145 IPR001179 GO:0003755
Prci14g1170 626 SMART tpr_5 451 484 IPR019734 GO:0005515
Prci14g1170 626 SMART tpr_5 402 435 IPR019734 GO:0005515
Prci14g1170 626 SMART tpr_5 485 518 IPR019734 GO:0005515
Prci14g1170 626 Pfam Tetratricopeptide repeat 456 484 IPR019734 GO:0005515
Prci14g1170 626 Pfam Tetratricopeptide repeat 486 509 IPR019734 GO:0005515
Prci14g1170 626 SUPERFAMILY FKBP-like 252 384 - -
Prci14g1170 626 MobiDBLite consensus disorder prediction 558 599 - -
Prci14g1170 626 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 151 263 - -
Prci14g1170 626 Gene3D - 263 387 IPR046357 GO:0003755
Prci14g1170 626 Gene3D - 2 150 IPR046357 GO:0003755
Prci14g1170 626 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 148 IPR001179 GO:0003755
Prci14g1170 626 FunFam Peptidylprolyl isomerase 390 546 - -
Prci14g1170 626 MobiDBLite consensus disorder prediction 558 582 - -
Prci14g1170 626 SUPERFAMILY FKBP-like 24 151 - -
Prci14g1170 626 MobiDBLite consensus disorder prediction 1 30 - -
Prci14g1170 626 FunFam Peptidylprolyl isomerase 9 151 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1170 35 550 Calmodulin-binding Proteins AT5G48570 31.002 8.54e-65 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1170 - - gmx:100818201 975.311