LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g1165	ATGTTGGCGATGGAGAAGGATTTTGATTCCAAGTTGAGGATTCAGAGTAATTCGTCTAGTGATGGGAGTGTCCCGAGATGTCAGAGCATTCCTTTCCGAGCTCCTCAGGAGAATTGCACCATCCAGGACTTTGAATTGGGAAAGATCTACGGCGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACGGGATCTGTATATGCATTGAAGATCATGGACAAAAAATTTATCACCAAGGAGAACAAAACAACTTATGTGAAGTTGGAACGTTTAGTGCTTGATAAATTGGATCATCCTGGAATTGTGCGGCTGTTTTTCACATTTCAAGACACATTTTCTTTGTACATGGCACTTGAATCGTGTGATGGTGGAGAACTTTTTGATCAAATAACCAGGAAAAGTCGTTTGTCAGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAATATGAGCTTGATACATCGTGATATTAAGCCAGAGAACTTGCTGCTTACAGCTGAAGGACATATAAAATTAGCTGATTTTGGGAGTGTCAAGCCTATGCAGGGAAGCCAAATCATGGACTTCCTTCCAAATGCAGCATCAGATGATAGAGCCTGCACATTGGTGGGGACAGCTGCTTATGTTCCCCCAGAGGTTCTTAATTCTTCTCCAGCAACATTTGGAAATGACCTTTGGGCCCTTGGATGCACATTATACCAAATGCTCTCAGGAACTTCTCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATCATAGCTAGAGATATTCGATTCCCGGACTATTTTTCTGATGAGGCAAGGGACCTTATTGACCAGTTACTGGATTTAGATCCCAGCAGGAGACCAGGTGCAGGACCTAACGGTTATACTGTTTTGAAAAGGCATCCATTTTTCAAGGGAGTGGACTGGAGTAACGTTAGGGATCAAATCCCCCCAAAACTTGCTATGGAACCAGGGTCACCTGAAGCTGATGATGTTTATGATTCATCATGGAGCCTTTCTCACGCTGGGGATGGTTCTGCTAGGCAATCTGATGGAAATATTGGTGCTACATCATCTTCTGAGGGGTTTGATCACATAACTAGGCTAGCCTCAGTAGATTCTTTTGATTCAAAGTGGCAACAATTTTTGGATCCTGGTGAATCTGTTATTATGACCTCAATGGTAAAAAAGATGCAGAAACTAACGAGCAAGAAGGTGCAGCTCATCCTTACTAACAAACCAAAGCTGATCTATGTGGATCCTTCAAAGCTTATTGTGAAGGGAAATATAATATGGTCTAATAATCCAAATGAATTATGCATTCAAGTGACAAATCCTTCTTGTTTCAAAATTTGCACACCAAAAAAGGTATTGTCATTTGAGGATGCCAAGCAGAGAGCTTTTCAGTGGAAGAAATCAATTGAAGAGCTTCAAAACCGGTGA	1467	0.4131	MLAMEKDFDSKLRIQSNSSSDGSVPRCQSIPFRAPQENCTIQDFELGKIYGVGSYSKVVRAKKKDTGSVYALKIMDKKFITKENKTTYVKLERLVLDKLDHPGIVRLFFTFQDTFSLYMALESCDGGELFDQITRKSRLSEDEARFYAAEVVDALEYIHNMSLIHRDIKPENLLLTAEGHIKLADFGSVKPMQGSQIMDFLPNAASDDRACTLVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSDEARDLIDQLLDLDPSRRPGAGPNGYTVLKRHPFFKGVDWSNVRDQIPPKLAMEPGSPEADDVYDSSWSLSHAGDGSARQSDGNIGATSSSEGFDHITRLASVDSFDSKWQQFLDPGESVIMTSMVKKMQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSNNPNELCIQVTNPSCFKICTPKKVLSFEDAKQRAFQWKKSIEELQNR	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g1165	488	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	163	175	IPR008271	GO:0004672\|GO:0006468
	Prci14g1165	488	Gene3D	Phosphorylase Kinase; domain 1	42	127	-	-
	Prci14g1165	488	FunFam	3-phosphoinositide-dependent protein kinase 2-like	128	327	-	-
	Prci14g1165	488	CDD	STKc_PDK1	42	312	IPR039046	GO:0004674
	Prci14g1165	488	PANTHER	SERINE/THREONINE-PROTEIN KINASE	29	339	-	-
	Prci14g1165	488	MobiDBLite	consensus disorder prediction	348	367	-	-
	Prci14g1165	488	ProSiteProfiles	Protein kinase domain profile.	44	312	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g1165	488	MobiDBLite	consensus disorder prediction	1	26	-	-
	Prci14g1165	488	Gene3D	-	360	488	IPR011993	-
	Prci14g1165	488	Pfam	PH domain	385	487	IPR033931	-
	Prci14g1165	488	FunFam	3-phosphoinositide-dependent protein kinase 1	358	488	-	-
	Prci14g1165	488	Gene3D	Transferase(Phosphotransferase) domain 1	128	328	-	-
	Prci14g1165	488	SUPERFAMILY	Protein kinase-like (PK-like)	24	339	IPR011009	-
	Prci14g1165	488	SMART	serkin_6	44	312	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g1165	488	Pfam	Protein kinase domain	46	312	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g1165	488	SUPERFAMILY	PH domain-like	306	487	-	-
	Prci14g1165	488	FunFam	3-phosphoinositide-dependent protein kinase 2-like	42	127	-	-
	Prci14g1165	488	Coils	Coil	468	488	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g1165	Prci-Chr14	11819699	11832363	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g1165	1	488	AGC Kinase Gene Family	AT3G10540	78.571	0.0	791

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_PDK1	Prci14g1165		Pkinase	4.9e-65	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g1165	K06276		-	mnt:21388684	835.484