Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1146 ATGGGTATTTGCTTCAGCATTGACTCTGATACAAAGGCCACAGGATATGAATCGATCACACCAACAACTAAGCAAGATAGAAGCAGAAGCTACAGTTCATTATCTCCTATGAATATCAAAGATCTCCGCCAAAGTCCTTGCTATGGGAATGTTGATATATTTTCCTATGATGAACTGAGGTTGGCCACCAAGCATTTTCGTCCAGACTTAATTCTGGGAGAGGGTGGTTTTGGAGTTGTGTATAAAGGAGTGATAGATGAAAATGTAAGGCCAGGTTACCAGGTCACACAGGTTGCTATTAAGGAGCTAAATCGAGACGGAATTCAGGGTGATAGGGAATGGCTGGCTGAAGTTAATTATTTAGGCCAGTTCAGTCACCCAAATCTTGTAAAACTTATTGGATATTGTTGTGAGGATGAACATCGGTCATTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAAAAACACCTTTTTCGCAGAGTGGGCTCAATGTTGACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCAGAGAGGCCCATCATATATCGTGACTTCAAGACATCAAATATTTTGCTAGATGCGGATTTCAACGCAAAGCTTTCAGACTTTGGTCTTGCAAAGGATGGACCTATGGGAGATCAAACCCATGTTTCAACACGTGTGATGGGCACATATGGATATGCTGCACCTGAGTATGTGATGACTGGGCATTTAACTGCTCGAAGTGATGTGTATGGTTTTGGGGTGGTGCTACTTGAGTTGCTTATTGGAAGGAAAGCATTAGACAAGAGCAGGCCCAGCAGACAACACAACTTGGTTGAGTGGGCACGTCCACTGTTGAATCATAACAAGAAACTTCTTAAAATTATAGACCCTAGAATGGATGGGCAATATTCAGCTAAAACTGCAATAAAGGTTGCCCATCTGGCAAACCAATGTCTTAGCCAAAATCCAAAAGGCAGGCCTCTAATGAGTCAGGTTGTTGAAATTCTAGAGAATTTTCAGTCAAAGGACGAAAACGAAGAAGAGCAAATGCTTCAAATTGGCAGCAGCAGTATAACCCTTTATGAGGTTCCGAAGGACACTAGAGCAATTGGGAAAAGGCAATGTGAAAATGACGAGGTTTATAGCAGCGAATGA 1176 0.4209 MGICFSIDSDTKATGYESITPTTKQDRSRSYSSLSPMNIKDLRQSPCYGNVDIFSYDELRLATKHFRPDLILGEGGFGVVYKGVIDENVRPGYQVTQVAIKELNRDGIQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRSLVYEYMASGSLEKHLFRRVGSMLTWSKRMKIALHAAKGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRKALDKSRPSRQHNLVEWARPLLNHNKKLLKIIDPRMDGQYSAKTAIKVAHLANQCLSQNPKGRPLMSQVVEILENFQSKDENEEEQMLQIGSSSITLYEVPKDTRAIGKRQCENDEVYSSE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1146 391 FunFam Probable serine/threonine-protein kinase PBL8 149 362 - -
Prci14g1146 391 FunFam Serine/threonine-protein kinase BIK1 33 148 - -
Prci14g1146 391 CDD STKc_IRAK 72 346 - -
Prci14g1146 391 Pfam Protein tyrosine and serine/threonine kinase 71 343 IPR001245 GO:0004672|GO:0006468
Prci14g1146 391 SUPERFAMILY Protein kinase-like (PK-like) 44 344 IPR011009 -
Prci14g1146 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Prci14g1146 391 PANTHER OS01G0588500 PROTEIN-RELATED 33 347 - -
Prci14g1146 391 ProSitePatterns Protein kinases ATP-binding region signature. 72 101 IPR017441 GO:0005524
Prci14g1146 391 ProSiteProfiles Protein kinase domain profile. 66 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g1146 391 Gene3D Transferase(Phosphotransferase) domain 1 149 367 - -
Prci14g1146 391 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1146 Prci-Chr14 11399404 11404947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1146 54 343 Glycoside Hydrolase AT3G07070 50.853 5.22e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci14g1146 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1146 - - pcin:129292940 786.563