LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g1130	ATGGACGACAATGACGACTGTATATTCTGTAGCCCTTTTCAAACTTGTCAGCCTAGAATAAGCTCCTCAACAGAACCTGATCTTCTGGGTGATCACTTCAACGATTATGACAGTAAATCCTTGGAGATATTTCAACAGTTCAAGACCAAGCAATCATCTCCACTGCTCCGTCATCATCCATGGCAGTTCTTCTCCCCACCATCTTGTGCTCATCTCGAAACCCTATCTTTCCGCACAGCCATTGACAACGACGACGACGACAATAACGTGAACCATGTAAGTTTTTCAATAACCGATGAACCAGATTATTATTATTATTTTGACGGTGGTGATCAGTCTTTGGAGATGTTAGTGCGTGGAATATTGAGTTGTTCATATCAGAGGTTGTTTTTTGAGCCTAATGGCAACAACACAAGCTCATCCATGTTAGACAAGACCAACAAGGAAACCTTCGAAGCTGTGTCTGAAAATGAAAGATCCGAGGTTGATGATGTGGAAGAGAGTGATCCGATAATGGTGGTTTTGGAATCAGAAGATCCTTTGGAGGACTTTAAGAGATCAATGGAGGAGATGGTGGAGTTTCTGGGAGTGAAGGATTGGGAAGGATTGGAGGAGTTGTTGAGTTGGTATTTAATAATAAATGAGAAGATAAATGAAGGGTTTATAGTGAGAGCTTTTATGGATTTAGTGTCTAATTTATCAACGTCTGCCGGTGGCTGCTCTTCTGCTGAGTCATACTCTGATGCACTTTCTTCTTTGCCATTGGCTTAG	771	0.4163	MDDNDDCIFCSPFQTCQPRISSSTEPDLLGDHFNDYDSKSLEIFQQFKTKQSSPLLRHHPWQFFSPPSCAHLETLSFRTAIDNDDDDNNVNHVSFSITDEPDYYYYFDGGDQSLEMLVRGILSCSYQRLFFEPNGNNTSSSMLDKTNKETFEAVSENERSEVDDVEESDPIMVVLESEDPLEDFKRSMEEMVEFLGVKDWEGLEELLSWYLIINEKINEGFIVRAFMDLVSNLSTSAGGCSSAESYSDALSSLPLA	256

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g1130	256	ProSiteProfiles	OVATE domain profile.	173	232	IPR006458	-
	Prci14g1130	256	NCBIfam	uncharacterized plant-specific domain TIGR01568	171	234	IPR006458	-
	Prci14g1130	256	Pfam	Transcriptional repressor, ovate	177	233	IPR006458	-
	Prci14g1130	256	PANTHER	TRANSCRIPTION REPRESSOR OFP7-RELATED	96	234	IPR038933	GO:0045892
	Prci14g1130	256	MobiDBLite	consensus disorder prediction	237	256	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g1130	Prci-Chr14	11192417	11193274	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	OFP	Prci14g1130		Ovate	1.8e-20	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g1130	-		-	pcin:129292581	499.975