Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1100 ATGGAAAACTTTGCATCCAGCATCAATGGTGATGAACTTTGCTTTCAAACTACAAACCAATCCTTCTTCTCTGGCTCTCTTCCTTACCAGCAGAGACCATTATTCATGAGTACTTTGAGCTCAACCATATGTTCAAAATCATCATCATCACCAAAGTCTTCATCGAATTTAAGCAACAGGAAGCCGTCTATAAATATAACTATCCCTCCCATGGGCTTAATGAGGATGAGCAAATCTGATGATGCCACAGTTGCAGAGGACAATAATAAACACTACCGAGGAGTTCGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGTGACCCGACTCGAAAGGGGTCGAGGGTGTGGCTCGGAACCTTCGACACAGCCATGGAAGCTGCAAAAGCATATGACAGAGCAGCGTTCAAGATGAGAGGAAGCAAAGCTATTCTGAATTTCCCTCTTGAGATTGGATCAGCGAGTTCAGAAGAAGAAGAATCTTCTAAGTCCACTACAGTGGAAAAAAAGGTGGTGGTTGGTGAGAAAAGGAGGAGAGAGGAAGAAGAAGAAGAGAGAGAAGTACAGGATCAGAAGAACGAAGAATTGAAGAAGATGATGAAGAAGAAGGAGGAGGAGGAGATTGTTTCTTCTTCTTCTACAACCACGGCTGGTCCGTTATCGCCGTCATGGTGGAAGGGGTTTTGGTGGGATACAGAGGCTGTGAACACTATTTTCAGTGTTCCTCCGTTATCGCCGTTATCTCCTCCAATGATGGTTATGTGA 768 0.457 MENFASSINGDELCFQTTNQSFFSGSLPYQQRPLFMSTLSSTICSKSSSSPKSSSNLSNRKPSINITIPPMGLMRMSKSDDATVAEDNNKHYRGVRRRPWGKFAAEIRDPTRKGSRVWLGTFDTAMEAAKAYDRAAFKMRGSKAILNFPLEIGSASSEEEESSKSTTVEKKVVVGEKRRREEEEEEREVQDQKNEELKKMMKKKEEEEIVSSSSTTTAGPLSPSWWKGFWWDTEAVNTIFSVPPLSPLSPPMMVM 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1100 255 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
Prci14g1100 255 MobiDBLite consensus disorder prediction 174 210 - -
Prci14g1100 255 MobiDBLite consensus disorder prediction 174 223 - -
Prci14g1100 255 Coils Coil 175 210 - -
Prci14g1100 255 MobiDBLite consensus disorder prediction 46 65 - -
Prci14g1100 255 CDD AP2 90 149 IPR001471 GO:0003700|GO:0006355
Prci14g1100 255 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Prci14g1100 255 FunFam Ethylene-responsive transcription factor 2 90 151 - -
Prci14g1100 255 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Prci14g1100 255 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Prci14g1100 255 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Prci14g1100 255 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Prci14g1100 255 PANTHER DNA-BINDING DOMAIN 55 207 IPR044808 GO:0003700|GO:0009873
Prci14g1100 255 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Prci14g1100 255 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1100 Prci-Chr14 10739382 10741029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1100 36 247 AP2-EREBP Transcription Factor Family AT5G51190 45.327 5.16e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci14g1100 AP2 2.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1100 K09286 - cave:132189648 160.999