Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1051 ATGCTGTTGTGGCCTCGCACTCCAACCTTTAGGCGGTCTCTACGTTCTCTTTCCAACGCCCATCGGAATCCTCACCATTCATCCTTTTTCCACCTAAACCTTTCTTCTTCAATCCAACCTCAGGTTTCTGGCGTCTTGGACGACGATTGCGAAGGCTTCTTGCCATGGTTAGAGTGGAAAGCTGGCTCTGGGATTTCATCATCGCTTTCAATCGGGAAATCTTCGTATGGCAGGTCTCTGTTTGCCTCTAGGATTATACACCCTGGAGAATGCATTTTACAAGTTCCTTATGCCGTGCAAATAAGTGTGGATAATTTACTCCCAGAAATCAGATCTTTGATCAGCAATGAAGTTGGAAATATTTCAAAACTTGCTGCTGTTATTCTAGTTGAGCAGAAACTGGGTCGGGACTCCGAGTGGGACCCATATATCAGCTGTCTTCCTCAGCAAGGACAGCTGCATAATACAGTTTTCGAAAGCCTCCTTAAAAGTTTTGGAGAATTTACTTTCAGGGATTTCATGCACGCGTGCACGCTTGTTGGTTGTCGGGCATGGGGAAGCATGAAGGGCTTATCTCTGATTCCGTTTGCAGATTTCTTGAATCACGATGGAGTTTCAGAAGCAATTGTAATGAGTGATGATGACAAACAATACTCAGAAGTTATAGCTGATCGTGGCTATGCTCCTGGTGAACAGGTATTAATAAGATATGGAAAATTTTCTAATACTACCTTGATGCTGGACTTTGGCTTTACACTTCCTTACAACAATTACGATGAGGTCCAGATCCAGCTTGAAATACCCAAGCATGATTCCCTGCATGACATGAAAATGGAACTCTTGAGGCGATATTTTGTGCGCTCTCCCAAAGACGTGAAAGGCTTAAGCAACTCTGTGAACTCTTTCATAGTCAAGGAAGTGATACCTACCAGTGCAAAAGGAAAGGGACTTCCACAATCTCTTCGTGCATTTGCTCGCGTCCTTTCTTGCACCTTTCCTCAGGAACTAAATGATTTGGCCATGGAGGCTGCACAAACTGATGGTAGGCTGGCCAGGCGGCCATTGTGCAACATCAACAAAGAGATTGAAGCACACCTGATCTTGTCTTCATTATTCACCAAATTAATTGCAGAGCGCTCTGAAGCTATTATGTCATTGGAATTTTCCAATGCTTCCATTTCTACAAAAGTTGATGTAAGAAGAACAATGGCTCGGGATCTCCTAGTTGGTGAGCTTCGCATCCTCAAATCTGCTTCTGCTTGGCTGGACAATTACTGTTTTTCTTTGTCTGGACAAGCTATTCATTGCTAG 1311 0.4378 MLLWPRTPTFRRSLRSLSNAHRNPHHSSFFHLNLSSSIQPQVSGVLDDDCEGFLPWLEWKAGSGISSSLSIGKSSYGRSLFASRIIHPGECILQVPYAVQISVDNLLPEIRSLISNEVGNISKLAAVILVEQKLGRDSEWDPYISCLPQQGQLHNTVFESLLKSFGEFTFRDFMHACTLVGCRAWGSMKGLSLIPFADFLNHDGVSEAIVMSDDDKQYSEVIADRGYAPGEQVLIRYGKFSNTTLMLDFGFTLPYNNYDEVQIQLEIPKHDSLHDMKMELLRRYFVRSPKDVKGLSNSVNSFIVKEVIPTSAKGKGLPQSLRAFARVLSCTFPQELNDLAMEAAQTDGRLARRPLCNINKEIEAHLILSSLFTKLIAERSEAIMSLEFSNASISTKVDVRRTMARDLLVGELRILKSASAWLDNYCFSLSGQAIHC 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1051 436 Pfam SET domain 77 238 IPR001214 GO:0005515
Prci14g1051 436 Pfam Rubisco LSMT substrate-binding 269 415 IPR015353 -
Prci14g1051 436 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 48 372 - -
Prci14g1051 436 SUPERFAMILY SET domain 48 257 IPR046341 -
Prci14g1051 436 Gene3D set domain protein methyltransferase, domain 1 19 155 - -
Prci14g1051 436 Gene3D set domain protein methyltransferase, domain 1 156 251 - -
Prci14g1051 436 Gene3D - 254 425 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1051 Prci-Chr14 10027526 10051803 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci14g1051 SET 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1051 K19199 - gmx:100818002 529.25